Gene Daci_2353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2353 
Symbol 
ID5747916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2592711 
End bp2593946 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content72% 
IMG OID641297435 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001563376 
Protein GI160897794 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCCG CACGACACCC CCAAGGCCAT GCCGTCATCA TCGGCGCCGG GCATGCCGGT 
GGCACCCTGG CCGCCCTGCT GCGCCAGTAC GGCCACGCGG GCCCGATCAC CCTGGTCGAT
GGAGAGGACC TGCCGCCTTA CCAGTGCCCG CCGCTGTCCA GGGCGTGGCT GCAGCAGGCC
ATGGACCCGG AGGAGCTGTT GCCGCGGCCC GCCGGTGCCT ATGCGGACCA GGCCATCACC
CTGCGCCCGG GCATGCGCGC CATGGCCATA GAGCCCGGCT CGCGGCAGGT GGCGCTGAAC
GACGGGTCGG CACTTCACTA CGACCACCTG GTCATTGCCA CAGGCGCCGC ACCGCGCTGG
CTGGCCCTGC CCGGGGGTGA TCGGCCCGGC GTCACCTGCC TGCGCACCAT GGAAGACGCG
CAGGCGCTGC GGGGCCACCT GCAGACCGCC CGCCGCCTGG CCATCATCGG CGGCGGCTAT
GTGGGTCTCG AAGTCGCGTC CACGGCCCGC AAGCTGGGGG TGCAGGTCCG GATCATCGAG
CGCGAAGGCA GGCTGCTGTC TCGCAGCGCC TCGCCGCAGA TGGCCGCGCA TCTGCACGGC
CTGCATGCAG GCCAGGGCGT GGAGGTGCAT TTCAACACCT CGGTCACCGC CATCCGGGGC
GACAGCCCCA CCGGCATCAC GGGCCTGAGG ATGGCCGATG GCTCACGACT GGAGTGCGAT
GCCGTGCTCA TCGGCGTGGG CGCGGCGCCC TGCGTGGAAC TGGCGCAGCC CCTAGGCCTG
GACTGTGCTG ACGGCATTGC CGTGGATGGC GAAGGCCGTA CCGCCATGGC CGGCATCTAC
GCCATAGGGC ATGCCACGCG CCGCCCGCTG GCCGGCTACC CCGGGCTGCA CCGGCTCGAA
AGCGTGCCCA GCGCGCTTGA ACAGGCCCGG CGCGCAGCCT GCGCCATCAC GGGCCGCGCA
CTGCCCGCCC ATGAAGCGCC CTGGTTCTGG TCCGACCAGT ACGACACCAA GCTGCAGATC
GCCGGCCTGC CCGGCCATGG CGACCAGACC GTGCTGCGCG GCAACCCGGC CAGCGGCAGG
TTCGCCGTAC TGCACCTGCG CGGTGGCCAG CTGTGCGCCG CCGAATGCGT GAATTCACCG
GGCGAATTCA TGGCAGCGCG CAAGGCCATC GCCGCCACGC ACTGCGCCGA CCCCGGTTTC
CCGCCCCTCC CCCCAAAAGC CCCGCCCACG CCATGA
 
Protein sequence
MTPARHPQGH AVIIGAGHAG GTLAALLRQY GHAGPITLVD GEDLPPYQCP PLSRAWLQQA 
MDPEELLPRP AGAYADQAIT LRPGMRAMAI EPGSRQVALN DGSALHYDHL VIATGAAPRW
LALPGGDRPG VTCLRTMEDA QALRGHLQTA RRLAIIGGGY VGLEVASTAR KLGVQVRIIE
REGRLLSRSA SPQMAAHLHG LHAGQGVEVH FNTSVTAIRG DSPTGITGLR MADGSRLECD
AVLIGVGAAP CVELAQPLGL DCADGIAVDG EGRTAMAGIY AIGHATRRPL AGYPGLHRLE
SVPSALEQAR RAACAITGRA LPAHEAPWFW SDQYDTKLQI AGLPGHGDQT VLRGNPASGR
FAVLHLRGGQ LCAAECVNSP GEFMAARKAI AATHCADPGF PPLPPKAPPT P