Gene Daci_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2328 
Symbol 
ID5747891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2566284 
End bp2567552 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content66% 
IMG OID641297410 
Producthypothetical protein 
Protein accessionYP_001563351 
Protein GI160897769 
COG category[S] Function unknown 
COG ID[COG2718] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.40975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.858132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGC AAATCATCGA TCGCAGGCTG GCCGGCAAGA ACAAGTCGGT GGGCAACCGC 
GAGCGCTTCG TGCGCCGCTA CAAGGCGCAG ATCGCCGAGG CGGTGCGCCG CGCGGTGGAC
AAGCGCGGCA TCCGCCACAT GGAGGAGTCC GAGAGCGTCT CCATCCCGCG CAAGGACATC
CGCGAGCCCG TGTTCCACCA CGGGCAGGGC GGCGTCCATG ACACGGTGCA CCCGGGCAAC
ACCGAGCATG TGCGCGGCGA CCGCATTGCC CGGCCGCAGG GCGGCGCAGG CGGCGGCGGC
TCCCAGGCCA GCGACAGCGG CGAGGGCGAG GACGACTTCA CCTTCACCCT GACCAAGGAA
GAGTTCATGG AACTGTTCTT TGAAGACCTG GCCCTGCCGC GGCTGCTGCG CACCCACATC
GGCAACACCA TGCAGTACAA GACGCGCCGC GCCGGCTACA GCCACGACGG CACGCCGCAC
AACCTGGCGC TGCTGCGCAC CATGCGCGGC GCCCTGGGCC GTCGCATTGC GCTGACCAAG
GCGCCGCACC GCGAACTCAA GGCACTGGAG GAGCAGCTGC AAGCGCTGCT GGCGCAGGAC
GATGGCACCA GCGAGGCGGC GGCCGAGCTG CAGCAGCGCA TCGATGCGCT GAAGCTGCGC
ATGGGCACGG TGGCCTTTCT CGACCCCATC GACCTGCGGT TTCGCAACCG CACGCGCGTG
CCTGCGCCCA TCAGCCAGGC CGTGATGTTC TGCGTGATGG ATGTGTCCGG CTCCATGGAC
CAGGACCGCA AGGACCTGGC CAAGCGCTTC TTCATCCTGC TGTACCTGTT CCTGACGCGG
CACTACGAGA AGATCGACAT CGTCTTCATC CGCCACCACA CGCAGGCGGC CGAGGTCAGC
GAGGACGAGT TCTTCCACTC CCAGGAAAGC GGCGGCACGG TGGTCAGCAG TGCGCTGGTG
CTGCTGGACC AGATCATCCG CGCGCGCTAT CCGTCCGGGG ACTGGAACAT CTACGTGGCC
CAGGCCAGCG ATGGCGACAA CTTCGGCGAC GACGGCTCCA ACTGCCGCAA CCTGCTGGTC
GAGAAAATCC TGCCGCTGGT GCGCTACTTC GCCTATGTGC AGGTGGTGCA GGAAGAGCAG
AGCCTGTGGC AGGAGTACAG CCAGGTGCTG CCGCTGTTCT CGCATTTCGC CATGCGCAAG
GTGTCGGACG CCAGCGAGAT CTATCCCGTG TTCCGCGACC TGTTCAAGAA AGAGGGGGTA
TCGGTATGA
 
Protein sequence
MALQIIDRRL AGKNKSVGNR ERFVRRYKAQ IAEAVRRAVD KRGIRHMEES ESVSIPRKDI 
REPVFHHGQG GVHDTVHPGN TEHVRGDRIA RPQGGAGGGG SQASDSGEGE DDFTFTLTKE
EFMELFFEDL ALPRLLRTHI GNTMQYKTRR AGYSHDGTPH NLALLRTMRG ALGRRIALTK
APHRELKALE EQLQALLAQD DGTSEAAAEL QQRIDALKLR MGTVAFLDPI DLRFRNRTRV
PAPISQAVMF CVMDVSGSMD QDRKDLAKRF FILLYLFLTR HYEKIDIVFI RHHTQAAEVS
EDEFFHSQES GGTVVSSALV LLDQIIRARY PSGDWNIYVA QASDGDNFGD DGSNCRNLLV
EKILPLVRYF AYVQVVQEEQ SLWQEYSQVL PLFSHFAMRK VSDASEIYPV FRDLFKKEGV
SV