| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2326 |
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| Symbol | |
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| ID | 5747889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2560559 |
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| End bp | 2563942 |
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| Gene Length | 3384 bp |
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| Protein Length | 1127 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297408 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001563349 |
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| Protein GI | 160897767 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTGC TGCGGGCCAT GTGCCTGGTG CTCGGCCTGC TGCTCGCCCT GCTGGCACCG
GGCCTGGCCA AGGCCGCACC GGCAGCAGGC CCTTTGGGTG CCTTGCAGGG CACATTGGGG
GGCGGATCGG CCTCCGACAA GGAACGAAGC AACGCCATTC AGGCCCAACT GGATGCCGCC
GCATCGGCGA CAAAGGAAGC CGATGCGCTG GCGCAGGAAC TGGACCGCCT GCGCGCCAGG
GCACGCACGC CCGTGCCGGC CCTGCCCGCG CCGCTGAGCG ACGAGCAGCT GGGCAGCCTG
TTCGATCGCT GGAAGGAACG CGTTCCCGCC AACGCCAGCC AGGAAGTGCT GGAGCGGCTG
CTGGCCGATG AGCGCGATGC CATCGCCGCA CTCAAGGTGG GCATCGAAAA ATCCGCGGCC
GACCAGGCCA ATCTGGTGTC CCAGCCCGGC CCGGGGCGGA TCGATCTGTC CATCCTCCAG
CAACGCGCGC AGGAAAACGC CGAGCCCGTG ACCGCCGAGC CCGGCGAAGC CCCCGACCTC
ACCCAGGCCC GCCAGGCAAG GCGCAGCGCA GAGCACCGCC GCGCCCTGCT GGAGCTGGCG
CTGCGACAGG AAGAGCAGTC CACCATCGAA GCCCGCCAGC GCCTGCTGGC CGCCCAGCTG
CAGGCCCAGC GCCGCGAGCT GCTGGAGCGC ATGCCGCGCG CCGCTTGGCT GACCCAGCGC
ATTGCCGAGC GCAGCCGCCA GCAACTGGAG CAGCAGGTGC AGGAGATGGA GCTGGCCGCC
CAGCACGCTT CCGCCGCCGA TCCCGCCATA CGCGACCTGG CCCAGCGCAA TGCCGCGCTG
GCCGCGCAGA TCCTCAAGAA CTCCAATGAA CTGGCGCAGG AGCGCAAGAC CCTGGCCAAT
GACGAATATG TCCGCGACCA ATTGAGCGCC ACGCTGCGCG ACACCCAGGC ACGCCTGCGG
CTGGGCGGTG GCAGCGCGGC CGTGGGCCAG TGGCTGTGGC AGCAGCGCGT GGAGCTGTCC
TCCGGCAACA CCTTGCAGTC CAGGCACCGC GCCGTGCAGC GCCAGCTGGC CGAGCTGCGG
CTGATGTTGT TCAACTCCAG CAAATGGCGC CAGAACCCGG GCGCGGACAC GGCGGCACAG
GCCCCGGCCG ACACTGCGGA TGCAGGCGGC GTGGCGGCAC CTGAACCTGC CGCCAGCGTC
ACCACGGCCA TCAATGCCTC CACCTCGGCA CAGCAGACCG CCCTGCTGGC CCGGCAGGTG
GCGCTCACCG ATCAATTGCA GCCCGTTTTG CTGCGCCGCA TTGCCGTGCT GGAGCAGACC
GATGAAGCCC TGCGCGCCGC CCTGCGCAGC GGCAACGAAC TGCGCCAGGT GCTGGACAAG
GAACTGCTGT GGTTCCCCAG CCACCGCCCC ATGGACCGCA CCTGGCTCAG CGAGTGGCAG
GCGCTGGAGC AGGACATCGA AGGCAGCAGC TCCCCCTGGA AAACCGCGCG CGCCCTGGCC
GCCAGCATCT GGAACGATCC CTGGGCGTTT GGCGCCGTCG GCCTGATCGT GGCCCTGCTG
CTGGGCCTGC GCCGCTATGC GCTGCGCCAG CTGCAGTCCA TCGCCGTGCG CGTGGGCGAC
TTCATGCGCG ACAACTTCGG GCTGAGCCTG CTCGCGCTGG GCTGGAGCCT GCTCTACACC
CTGCCCTGGA GCTTTGCGGC CGCGGCGCTG GGCAGCCTGC TGCAAGGCCC CGAAACCGTG
GGCACGGCGC TGGAGCCGCT GGGCGCCACC CTGGTCCAGC TCAGCGATTT CATCTTCGTG
GCCACTTTGC TCAACGCCCT GTTCTGCCCG GGCGGGCTGG CACTGGCCCA CTTCGGCTGG
CCGGCCGCCC GCGTGCAGAT GCTGCGCCAG ATGGTGCGCC GCGCCGCCTG GCTCATCGTG
CCTGCCGAAC TGCTGGGCGG CCTGGCCTTC TACAGCCATG ACAACCACGC CATCAGCACC
TGGGGACGCA TCTCCATCCT CATGCTGTCG CTGGGCCTGG CCTGGATGGC CTGGCTGTAC
TTTCGCCGTG TCATGCAGCA AAAGCGGCCC GGCATCCACT GGGGCCAGAT CGTCAGCGTG
GTGCTGATGC TCATGCTCAG CGCGCTGGCC GTGGGCATCG TGCTCGGCTA TGTCTACACG
GCCACCGAAT TCATCCAGGC CCTGATGGCC AGCTTCGTGT TCCTGGGCGC GGTCGAGGTC
GTGGTCAACC TGCTGCGGCG CTGGCTGCTG CTGGGCGAAC GACGCCTGGC GCTGAACCGG
CTGCGCGAAG CCGCCAGGCT GGCGCAGAGC GGCTCGGGCG TGGACACCGG CAAGGCACCC
ACCGACGAAG CCACCCAGAT GGCCCTGGTC ACCGTGGGCG CCCAGGCGCA CCGGCTGCTG
GGCCTGCTGC AGCAGGTGCT GGTCGTGCTG ACCCTGGTCT ACGCCTGGCT GCCCGTGCTG
CCTGCGCTGC TGCGCTCCGA AGGCGTGGTG CTCTGGTACA CCACCAACAC CGGCGCCGAC
GGCATCGCGC ATGCCGCCCC CGTGAGCCTG ATGGACGCGC TGCTGGGCGT GATGATCCTG
CTGCTCACCT TCAGCTTTGC ACGCAACCTG CCGGGCCTGC TGGAAGTGAC GCTGTCGGCC
TCCAACCGCA TCAGCAGCTC CGCGCGCTAC ACCCTGGCCA CGCTGGCGCG CTACGCCATC
ACCATCGCGG GCACGGTCAG CGCCTTCACG CTGCTGGGCC TGCGCTGGGG ACAGCTGCAG
TGGATGGTGG CGGCGCTCAC CGTGGGCCTG GGCTTTGGCC TGCAGGAGAT CTTCGCCAAC
TTCGTCTCGG GCCTGATCCT GCTGGTGGAG CGGCCCTTCC GCGTGGGCGA TGTCATCACC
ATCGACACCC TCACCGGCAC CGTCACGCGC ATCCGCACGC GGGCCACCAC GGTGCTGGAC
TTCGACAACA AGGAAATCGT CATCCCCAAC AAGACCTTCA TCACCGGCCA GGTGACGAAC
TGGACCTTGA GCGACGACGT GACCCGCCTG GTGATCGACG TGCCCGTGGC CCACGGCAAT
GACCCCGAGC GAGTGCGCGA CATGCTGCTG GGCATTGCCA GGGAACACCC CCAGGTGCTG
CGCGAACCCG AGCCCAACTG CTGGTTCATG GCGCTGGAAG GCAACGGCCA GCGCTTCGAG
CTGCGCGCCT ACGTGGGCAA GGTCGAAGAC CGCCTGCCCG TGCGCCACGA CCTCAACCGC
CGCGTCAATG ACCGGCTCAA GGACGCTGGC ATTGCCGTGG CCTTCCCGCA GCTGGACCTG
CATGTGCGCA ACATGCCGGC CCATGCACCG GGGCAGGCAC CGGGGCAGGC ATCTGTGCAG
ACCCCACCCC ATCCGACGGC ATGA
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| Protein sequence | MHLLRAMCLV LGLLLALLAP GLAKAAPAAG PLGALQGTLG GGSASDKERS NAIQAQLDAA
ASATKEADAL AQELDRLRAR ARTPVPALPA PLSDEQLGSL FDRWKERVPA NASQEVLERL
LADERDAIAA LKVGIEKSAA DQANLVSQPG PGRIDLSILQ QRAQENAEPV TAEPGEAPDL
TQARQARRSA EHRRALLELA LRQEEQSTIE ARQRLLAAQL QAQRRELLER MPRAAWLTQR
IAERSRQQLE QQVQEMELAA QHASAADPAI RDLAQRNAAL AAQILKNSNE LAQERKTLAN
DEYVRDQLSA TLRDTQARLR LGGGSAAVGQ WLWQQRVELS SGNTLQSRHR AVQRQLAELR
LMLFNSSKWR QNPGADTAAQ APADTADAGG VAAPEPAASV TTAINASTSA QQTALLARQV
ALTDQLQPVL LRRIAVLEQT DEALRAALRS GNELRQVLDK ELLWFPSHRP MDRTWLSEWQ
ALEQDIEGSS SPWKTARALA ASIWNDPWAF GAVGLIVALL LGLRRYALRQ LQSIAVRVGD
FMRDNFGLSL LALGWSLLYT LPWSFAAAAL GSLLQGPETV GTALEPLGAT LVQLSDFIFV
ATLLNALFCP GGLALAHFGW PAARVQMLRQ MVRRAAWLIV PAELLGGLAF YSHDNHAIST
WGRISILMLS LGLAWMAWLY FRRVMQQKRP GIHWGQIVSV VLMLMLSALA VGIVLGYVYT
ATEFIQALMA SFVFLGAVEV VVNLLRRWLL LGERRLALNR LREAARLAQS GSGVDTGKAP
TDEATQMALV TVGAQAHRLL GLLQQVLVVL TLVYAWLPVL PALLRSEGVV LWYTTNTGAD
GIAHAAPVSL MDALLGVMIL LLTFSFARNL PGLLEVTLSA SNRISSSARY TLATLARYAI
TIAGTVSAFT LLGLRWGQLQ WMVAALTVGL GFGLQEIFAN FVSGLILLVE RPFRVGDVIT
IDTLTGTVTR IRTRATTVLD FDNKEIVIPN KTFITGQVTN WTLSDDVTRL VIDVPVAHGN
DPERVRDMLL GIAREHPQVL REPEPNCWFM ALEGNGQRFE LRAYVGKVED RLPVRHDLNR
RVNDRLKDAG IAVAFPQLDL HVRNMPAHAP GQAPGQASVQ TPPHPTA
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