Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2318 |
Symbol | |
ID | 5747881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2551992 |
End bp | 2553203 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641297400 |
Product | putative substrate-binding periplasmic (pbp) ABC transporter protein |
Protein accession | YP_001563341 |
Protein GI | 160897759 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.555979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.535279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCAAC GCCCCAAGAC ATCGCTGATG ACACCGCTGG CCCTGGCACT GTGCGCCGCC GCACTGGCAA CGCCGGCCCT GGCGCAGCAG GACAAGGTTC GGATCGGCTT CATCACCGAC ATGTCCAGTC TCTATGCCGA TGTCGAGGGC AAGAACGGCG CCGTGGCGAT ACAGATGGCC ATCGACGACT ACGGCGGCAA GCTGCTGGGC AAGCCCATCG AGCTGCTGAC GGCCGACCAC CAGAACAAGG CCGACATTGC CGCCAGCAAG GCGCGCGAGT GGATAGACAC GCAGGGCATC AGCCTGGTGT TTGGCGGCAC GAACTCGGCC ACGGCCCTGT CCATGGCCAA GGTGGCGCAG GAGAAAAAGC GGGTCTTCAT CGACAACGGC GCAGGCAGCT CGGCGCTGAC CAACGAGCAG TGCAGCCCCT ACACCGTGCA CTACGCCTTC GACACCGTGG CCCTGGCCAA GGGTACGGGC GCGGCCGTGG TGGAGGCCGG CGGCAAGAGC TGGTACTTCG TGACGGCCGA CTATGCCTTC GGCCATGCGC TGGAGGCGGA CACCACCAAG ATCATCGAGG CGCGCGGCGG CAAGGTGCTG GGCTCGGTCA AGACGCCGCT GAACGCCAGC GACTTCTCCA GCTTCATGCT GCAGGCGCAG AACTCCAAGG CCCAGATCCT GGGCCTGGCC AACGCAGGTG GCGACACCAT CAACTCCATC AAGGCCGCGC GCGAGTTCGG CGTGACCAAG GACATGAAGC TGGCCGGCCT GCTGGTGTTC TTCACCGATG TGCACAGCCT GGGCCTGAAA AACACCCAGG GCATGCAGTT CACCACCAGC TGGTACTGGG ACATGAACGA TGCCTCGCGC AAGTTCGCCG ATGCCTTCAT GGCCAAGACC CAGCGCCGCC CCAGCGAGAT CCAGGCGGCC GACTACTCGG CCACCATGAA CTGGCTCAAG GCCGTGGAGA AGGCCGGTAC GCTGGATGCC GACAAGGTCA TGGCCACCTG GCGCGGCATG AAGATGGATG ACTTCTTCGG CAGCGGCTAC CTGCGCGAGG ACGGCCGCTA CGTGCACGAC ATGTACCTGA TGGAAGTGAA ATCCCCCGCC GAATCCAAGG GCACCTGGGA CTACTACAAG CTGGTCAAGA AGCTGCCCGC CGAGCAAGTC TGGACCACCA AGGCCGAGAG CAAGTGCCAA TATTGGCGCT GA
|
Protein sequence | MQQRPKTSLM TPLALALCAA ALATPALAQQ DKVRIGFITD MSSLYADVEG KNGAVAIQMA IDDYGGKLLG KPIELLTADH QNKADIAASK AREWIDTQGI SLVFGGTNSA TALSMAKVAQ EKKRVFIDNG AGSSALTNEQ CSPYTVHYAF DTVALAKGTG AAVVEAGGKS WYFVTADYAF GHALEADTTK IIEARGGKVL GSVKTPLNAS DFSSFMLQAQ NSKAQILGLA NAGGDTINSI KAAREFGVTK DMKLAGLLVF FTDVHSLGLK NTQGMQFTTS WYWDMNDASR KFADAFMAKT QRRPSEIQAA DYSATMNWLK AVEKAGTLDA DKVMATWRGM KMDDFFGSGY LREDGRYVHD MYLMEVKSPA ESKGTWDYYK LVKKLPAEQV WTTKAESKCQ YWR
|
| |