Gene Daci_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2308 
Symbol 
ID5747871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2538467 
End bp2539654 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content61% 
IMG OID641297390 
Productintegrase catalytic region 
Protein accessionYP_001563331 
Protein GI160897749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.349393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTGGA AGGAGTGCGC ACCCATGGAC GAGAAACTGC TCTTCATAGC CGACCACCTG 
CGCGGTGGTG CGCCGCTGAG CGAGCTGTGC AGGCGCTACG GCATCAGCCG CAAGACGGCC
TACAAGTGGG TTGAGCGTTA CCGCCAACTG GGCATGGATG GATTGCAAGA ACGCAGTCGC
AGGCCCCACG GGAACAATCA GGCGATCAGC TATGCACAGC GCCGGGCCAT CATTGAGCTG
CGCACGCAGC AAAGGTCACA GATGGGGCCC AAGAAGCTGC ACGCTTTGCT CCTGCAGCGC
TGGGGCCCAC AGGAGACACC CAGCAAAACC ACCATCTACA ACGTGCTGAA GGCTGAGGGG
CTTGTTTGCA GCAGGCGTGT ACGCAGACGC TCGGTGCCTA CGGCCCAGCC CTTGCGAACG
AGCAAGCAGC CCAATGGGGT GTGGAGTGCA GACTACAAAG GCCAGTTCAA GACAGCCGAT
GGTCACTGGT GCTATCCATT GACCATCATG GACCACGCCA GCCGCTATTT GCTGGCCGTG
CACGTCTACG ACAGCCCCAA CTACGAGGAT GCCAAACGCA GCTTCGAACA GGTGTTTCGG
CAATACGGAC TGCCCGAGCG CATACGCAGT GACAACGGTC CGCCATTCGC GACTACTGGC
GTGGCGGGCC TGTCACGCCT GGCGATATGG TGGATAAGGC TGGGCATCAG GCCGGAGCGC
ATCGAGAGGG GCAAGCCACA GCAAAACGGT CGCCACGAGC GGATGCACCG CACGCTCAAG
CATGCCCTGG GCAAAGAGCC TGCGGCGGAC AAAGCGGCAT TGCAGATGCA GCTCGATGCC
TTTGTGGAGC ACTACAACCA GCAGCGCCCG CATGAGGCCT TGCAGCAAAG CATGCCGGCC
CAGCATTACA GCGACTCGGC CAGGCCATAC CCCTCAAAGC TACCGGAGCT GCAGTACCCG
AAGCATTGGG AACGAGTTCG AGTCAGCCAC AACGGCCTGA TTTACTGGCG AGCGCTGCGG
GTCTACATCG GCTACCTGCT GGCGGGGCAG TGGATCGGGA TGCAGGAGGT GGCCGCTGGC
CAGTGGGATG TGTATCTGGG GCCGGTGCGA CTGGGCTGCT TCAACGAAGA GGATGTGCGA
GGACCCCAGA AGGACTATGT GAGCTTGAAG TGTTACCCAT GTCTGTGA
 
Protein sequence
MPWKECAPMD EKLLFIADHL RGGAPLSELC RRYGISRKTA YKWVERYRQL GMDGLQERSR 
RPHGNNQAIS YAQRRAIIEL RTQQRSQMGP KKLHALLLQR WGPQETPSKT TIYNVLKAEG
LVCSRRVRRR SVPTAQPLRT SKQPNGVWSA DYKGQFKTAD GHWCYPLTIM DHASRYLLAV
HVYDSPNYED AKRSFEQVFR QYGLPERIRS DNGPPFATTG VAGLSRLAIW WIRLGIRPER
IERGKPQQNG RHERMHRTLK HALGKEPAAD KAALQMQLDA FVEHYNQQRP HEALQQSMPA
QHYSDSARPY PSKLPELQYP KHWERVRVSH NGLIYWRALR VYIGYLLAGQ WIGMQEVAAG
QWDVYLGPVR LGCFNEEDVR GPQKDYVSLK CYPCL