| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2294 |
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| Symbol | |
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| ID | 5747857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2522509 |
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| End bp | 2523282 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297377 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001563318 |
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| Protein GI | 160897736 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00115505 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGACC ATTCCATTCG CGGCAAGGTG GCGCTGATTG CAGGCGGCGC CAAGAATCTG
GGCGGGCTGA TTGCCCGTGA TCTGGCGGGG CACGGCGCGC GGGCCGTGGT GGTGCACTAC
AACAGCGAGT CTTCACGGGC CGAGGCGGAG ACCACGGTGG CCGCAGTGCG TGCGCTGGGG
GCCGAGGCCG TGGCGCTGCA GGGTGACCTG ACGCGCGCTG GCGCTGTGGA GCGGCTTTTT
GCAGAGGCTG TGGACGCCGT GGGCCGGCCG GACATTGCCA TCAACACGGT GGGCAAGGTG
CTCAAGAAGC CGCTGATGGA GATCAGTGAG GCGGAGTACG ACGAGATGGC CGCCGTCAAC
GGCAAGTCGG CGTTTTTCTT CCTCAAGGAG GCGGGGCGCC ATGTCAACGA CCACGGCAAG
ATCGTGACCC TGGTGACCTC GCTGCTGGGC GCGTTCACGC CGTTCTATTC CTCCTACGCG
GGCACCAAGG CGCCGGTGGA GCATTTCACG CGGGCGGCGG CCAAGGAGTT CGGGGCGCGG
GGCATTTCGG TCACGGCCGT GGGGCCGGGG CCCATGGACA CGCCGTTCTT CTACGGCCAG
GAAGGCGCGG ACGCCGTGGC CTATCACAAG AGCGCGGCGG CGCTGTCGCC GTTCTCGCCT
TCGGGGCTGA CGCATATCGA AGACGTGGTG CCCTTCATCC GCCACCTGGT CAGCGACGGC
TGGTGGATCA CCGGGCAGAC CATCCTGATC AACGGCGGCT ACACCACCAA GTAG
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| Protein sequence | MADHSIRGKV ALIAGGAKNL GGLIARDLAG HGARAVVVHY NSESSRAEAE TTVAAVRALG
AEAVALQGDL TRAGAVERLF AEAVDAVGRP DIAINTVGKV LKKPLMEISE AEYDEMAAVN
GKSAFFFLKE AGRHVNDHGK IVTLVTSLLG AFTPFYSSYA GTKAPVEHFT RAAAKEFGAR
GISVTAVGPG PMDTPFFYGQ EGADAVAYHK SAAALSPFSP SGLTHIEDVV PFIRHLVSDG
WWITGQTILI NGGYTTK
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