Gene Daci_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2292 
Symbol 
ID5747855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2519590 
End bp2520417 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content69% 
IMG OID641297375 
Producthypothetical protein 
Protein accessionYP_001563316 
Protein GI160897734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000629985 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCATGA CCCATACCCA GGCGCTGTCC AAGCTGGCCG CCGACACTCT TGTGCAGACC 
CTGGAGGAAG ACGTGGCGCG CGTGATGGCA CGCACGTTTG CGCTGGGCCG GCACGATGCC
GCTATTGCGG CCAACTACGG CGGCCATGCG CTGCCGCCCC TGCTGCGGCG CTGGAGCTGC
GTGCTGCAGG CCGGTGACGC CAAGGCAACG GCGCTGTACC GGCACAAGAC GGCGCTGGCC
CTGGCGATCG TGCTGCACAG GAACGGCCTG GCCGACGCGG GCCTGAACGC GGCTGCGCGC
ACGGCCATCG ATGTGCTCAA TGCCGAGGTG GCGCTCAGCG ATGATTTCTT TCGCAAGTCG
GCGCAGATTC GCCAGGACTT CCTGGACACG CCGCCCGCGC CGCCCAAACG CTCGCCGGGC
CTGCCCGACA GCCTGACCTT CTACCGCGCG GCCGACGTGG TGGCCATGGA GCTGGACGGG
CGCTTCCACG CCCTGTACGT GCACGGCTGC GCCCGGACCA ACCAGAGCCC CATCGTCGAG
TTCTACGACG CGGTGTTCGA CCACGTGCCG CAGATGGCGG AGCTGGCCGA CGTGCGCGCC
CGGGGCCGGC GCTACAACGA TGGCGTGGGA CGGGTGGCGC GGTTTTCCAT ATCGGGCCTG
AAGTTCCTGC CCGACCCGGC CGGCCAGTTC ACCCTGGTCA AGGCCTGCGT GGAGACGCCG
CCGGACCCCG GCCATCTGCA AAAGGGCGAC TGGCTCTACA CCGTGTCCGA CATCTTCGAG
CTGCAGTCCG AGGTGGACTC CATGTTCGGC CCCGGCGGCA AGCCCTGA
 
Protein sequence
MAMTHTQALS KLAADTLVQT LEEDVARVMA RTFALGRHDA AIAANYGGHA LPPLLRRWSC 
VLQAGDAKAT ALYRHKTALA LAIVLHRNGL ADAGLNAAAR TAIDVLNAEV ALSDDFFRKS
AQIRQDFLDT PPAPPKRSPG LPDSLTFYRA ADVVAMELDG RFHALYVHGC ARTNQSPIVE
FYDAVFDHVP QMAELADVRA RGRRYNDGVG RVARFSISGL KFLPDPAGQF TLVKACVETP
PDPGHLQKGD WLYTVSDIFE LQSEVDSMFG PGGKP