Gene Daci_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2287 
Symbol 
ID5747850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2515847 
End bp2516563 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID641297370 
Productarsenical resistance protein ArsH 
Protein accessionYP_001563311 
Protein GI160897729 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID[TIGR02690] arsenical resistance protein ArsH 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.563359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00414028 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCCAATCA CTGAGCTGCC GAACCTGGAC CCGCAATCGT TTGACGCCCC CAGCCTGCAG 
CGGCTGCTGC CGCAGGCACG GGCCACGCAC GCGCCCCGCA TCCTGCTGCT GTATGGCTCG
GTGCGCGAGC GCTCCTACAG CCGCCTGCTC ACCGAAGAAG CTGCCCGGCT GCTGCGCCAC
ATGGGCGCCG AACCCCGCAT CTTCGATCCG CACGGCCTGC CCCTTCCCGA TGCGGCGCCC
GACAGCGACC CCAAGGTCCG CGAACTGCAC GGGCTGGCCC GCTGGGCCGA AGGCATGGTG
TGGACCTCGC CTGAACGCCA CGGCGCCATG ACCAGCATCC TCAAGGCCCA GATCGACTGG
ATTCCCCTGT CCTTCGGCGC CGTGCGTCCC ACCCAGGGCA AGACCCTGGC CGTGATGCAG
GTCTCGGGCG GCTCGCAATC CTTCAACGCC GTCAACCAGA TGCGCGTGCT GGGCCGCTGG
ATGCGCATGC TCACCATCCC CAACCAGTCG TCGGTGGCCA AGGCCTACCA GGAGTTCGAC
GACGCAGGCC GCATGAAGCC CTCGCCCTAC TACGAGCGCG TGGTGGACGT GATGGAGGAA
CTGGTCAAGT TCACCCTGCT GACGCGCGAC TGCACCGGCT ACCTGGTAGA CCGGTACAGC
GAACGCAGGG AGAGCGCCGA GGCGCTGTCG CGGCGGGTCG ACCAGGGCAG CATCTAG
 
Protein sequence
MPITELPNLD PQSFDAPSLQ RLLPQARATH APRILLLYGS VRERSYSRLL TEEAARLLRH 
MGAEPRIFDP HGLPLPDAAP DSDPKVRELH GLARWAEGMV WTSPERHGAM TSILKAQIDW
IPLSFGAVRP TQGKTLAVMQ VSGGSQSFNA VNQMRVLGRW MRMLTIPNQS SVAKAYQEFD
DAGRMKPSPY YERVVDVMEE LVKFTLLTRD CTGYLVDRYS ERRESAEALS RRVDQGSI