Gene Daci_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2282 
Symbol 
ID5747845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2509983 
End bp2510969 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content67% 
IMG OID641297365 
Producthypothetical protein 
Protein accessionYP_001563306 
Protein GI160897724 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.736343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00501521 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGTAT CACCATCGAA CCGCCGCCAA TGGCTTGCCA TGGGCACGGC CCTTATCAGC 
CTTTCTTGCG CGGCGTCCGC TGCATCCACC ACCTATCCAT CCAAGCCGCT GCGAATTCTG
GTGCCCTATG CCGCAGGCGG GGCCTCGGAC AACATCGCGC GCCAGATTGC GGCGGCCATC
ACGGGGCAGA CCGGACAGGC CGTGGTGGTG GACAACCGCC CTGGCGGCTC GGGCGTGATC
GCCGTGCAGG CCCTGCAGGC CGCACCCGCC GACGGCCATA CCTTTGCGGT CTTCGATCCC
TCGGTGGCGT CGATGAACCC GTTCCTCTTC AAGAAGCTGG CCTATGACCC GGAGCGTGCG
CTGGCGCCGG TATCGGTGCT GGCGCGCAAT CCGATCGCGT TGGTGGCCTT GCCTTCGTTT
CCCGCAGGCA GTGTCCGGGA GCTGGTGGCC CATGCCAGGT CGCATGGCGA CCTGAGCTAT
GCCTCCACCG GCAATGGCAA CGGCACCAAC CTCGCCATGG AGATGTTCCT GGCCGGCAGC
GCCATCCAGA TGGTGCACGT GCCCTACAAG GGCAGTGCCC CGGCCATGCA GGCCCTGTTG
GCGGGGCAGG TGCCGGTCTT CATGTCCGAC CTGCCCACCG TCGTGCCCTA TGCCCGGTCG
GGCAAGGTCC GGGTCATCGC CGTCACGGGA GACCGGCGCT CGCCGCATCT GCCCGATGTG
CCGACCTTTG CGGAGGCGGG CGCGCGCGGC GTGGAGATCG CCAACCATTT CAGCGCCTTC
GTCGCTGGCG GCACGCCGCC CGCTGTGGTG GAGCAGCTCA ACGCCGTGCT GCACAAGGCC
CTGGCTGATC CCCGGTTGCA GAAGAATTTC TCGGAAATGG CGCTGGAGGT TTCGCCGTCC
ACCCCGCAGC AATTGCAGGC CATGGTCAGG GACGACTCCG AGAAATACGG TGCCGTGATC
AGGCGCCTGA ACCTGAGCAT CGATTGA
 
Protein sequence
MPVSPSNRRQ WLAMGTALIS LSCAASAAST TYPSKPLRIL VPYAAGGASD NIARQIAAAI 
TGQTGQAVVV DNRPGGSGVI AVQALQAAPA DGHTFAVFDP SVASMNPFLF KKLAYDPERA
LAPVSVLARN PIALVALPSF PAGSVRELVA HARSHGDLSY ASTGNGNGTN LAMEMFLAGS
AIQMVHVPYK GSAPAMQALL AGQVPVFMSD LPTVVPYARS GKVRVIAVTG DRRSPHLPDV
PTFAEAGARG VEIANHFSAF VAGGTPPAVV EQLNAVLHKA LADPRLQKNF SEMALEVSPS
TPQQLQAMVR DDSEKYGAVI RRLNLSID