Gene Daci_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2280 
Symbol 
ID5747843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2508533 
End bp2508958 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID641297363 
Productputative TIS1421-transposase orfA protein 
Protein accessionYP_001563304 
Protein GI160897722 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.676349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0212696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTG TCCTCATGGC ACGACGACCC GTAAGCAAAG AGCTGTGGCG ACAGCTACGA 
CCCCTGATCC CAGCCTTCGT GCCTTCTACC AAAGGCGGTG CGCGCAAGCT CGCAGCCAGC
GATGAAGCCG CCATCAACGG CATCCTGTTC GTGCTGCAAA CAAGCATTCC ATGGGAAGAC
CTTCCCCAAT CCCTTGGGTA CCGCAGCGGC ATAACTTGCT GGCGGCGCCT GCGCGACTGG
AATGCCGCTG GTGTCTGGGA GCAGTTGCAC CAGGCAATGC TGACTCGCTT GCGTGAACAT
GACCAGATCG ATTGGAGCCG AGCCAGCATT GATGGCTCCT CGGTGCCAAG CCCCCGGGGG
ATCAGGAAAC GGGCCCAAAC CCCACGGACA GAGGCAAGCT CGGCTCAAAG CGGCACATCG
ATGTAA
 
Protein sequence
MLAVLMARRP VSKELWRQLR PLIPAFVPST KGGARKLAAS DEAAINGILF VLQTSIPWED 
LPQSLGYRSG ITCWRRLRDW NAAGVWEQLH QAMLTRLREH DQIDWSRASI DGSSVPSPRG
IRKRAQTPRT EASSAQSGTS M