Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2280 |
Symbol | |
ID | 5747843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2508533 |
End bp | 2508958 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641297363 |
Product | putative TIS1421-transposase orfA protein |
Protein accession | YP_001563304 |
Protein GI | 160897722 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.676349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0212696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGCTG TCCTCATGGC ACGACGACCC GTAAGCAAAG AGCTGTGGCG ACAGCTACGA CCCCTGATCC CAGCCTTCGT GCCTTCTACC AAAGGCGGTG CGCGCAAGCT CGCAGCCAGC GATGAAGCCG CCATCAACGG CATCCTGTTC GTGCTGCAAA CAAGCATTCC ATGGGAAGAC CTTCCCCAAT CCCTTGGGTA CCGCAGCGGC ATAACTTGCT GGCGGCGCCT GCGCGACTGG AATGCCGCTG GTGTCTGGGA GCAGTTGCAC CAGGCAATGC TGACTCGCTT GCGTGAACAT GACCAGATCG ATTGGAGCCG AGCCAGCATT GATGGCTCCT CGGTGCCAAG CCCCCGGGGG ATCAGGAAAC GGGCCCAAAC CCCACGGACA GAGGCAAGCT CGGCTCAAAG CGGCACATCG ATGTAA
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Protein sequence | MLAVLMARRP VSKELWRQLR PLIPAFVPST KGGARKLAAS DEAAINGILF VLQTSIPWED LPQSLGYRSG ITCWRRLRDW NAAGVWEQLH QAMLTRLREH DQIDWSRASI DGSSVPSPRG IRKRAQTPRT EASSAQSGTS M
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