Gene Daci_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2278 
Symbol 
ID5747841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2507249 
End bp2508127 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content45% 
IMG OID641297362 
Producthypothetical protein 
Protein accessionYP_001563303 
Protein GI160897721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.437918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00805635 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTAACC TCAGAGCATT GGCAGAGTCC GTGAGCAGTG AGGCTCCAAA TTTTGAAGGT 
AAATGGCATA CCATTGATTT TCAGCCTGAG CTGGATGTGC CTCAAACCTT TGTTATTGGA
GTTGCACTGT CTGAAAAGGG TCGACTGGTT GATTTCAGAG TTGCTGAAGA TGCTTCACGA
TTAAAGTGCT TTTACGGTAA GCGATTTAGT AATGAGACTT GGGGTTGGTT GCGCAATGAA
TTATTGGCGG ATTTGAAAGC TAATAAAGGC AATGGCATCG CGAAGTATGA GAGTCCAAGT
CCGCAGATAA GCTTTGGCAT TGGTCACTAT GCAAGCGGAA CTGACAGGTT GTCGGTGTTG
GCACGTACAT TTCAGCGCGT GGTTACGGTT ATTCCAAATG AGGTAAAGCC AAGAGTCTAC
GGAATGGCTC AACAGGACTT GAGAAGTCAG ATGGCGGGCT TACTAAAGCA GCGGCTAGGT
ACGCAGTTTG AGGTGATACA TCAAGATGAG GATTGCTATC GTGTGGTAGA TGGCTCTACG
GTACACACAT TTGATGTTAA CTATGACAAT CTCAAGGTCG CTAGCAGCGT TGTATCTGCC
AGTTATGTGA ATTTGGCTAC GGCTCAATTG AATTTGAGCT CGAGCATGAG CGATTTGCTT
ATGTTTAACA AGCTCCGGCC AAGAGAGCAA TTAGGCCTTG CAATACTTGT TCCTTCCAAA
AATACGCTGC CTAGTGCCAG TGTCTATGCT TGGGAAAAAT GGTGGGAAAA TATGTCTTAT
AAGCTCAAGG AGTCAGAGCT TATGTTATTG GCTGAAGCAG ATCAGCCGGA AATTTTGGCG
GAAATTATGC AAGATTGGTA CGTGAGTGAC ATTTGCTAA
 
Protein sequence
MINLRALAES VSSEAPNFEG KWHTIDFQPE LDVPQTFVIG VALSEKGRLV DFRVAEDASR 
LKCFYGKRFS NETWGWLRNE LLADLKANKG NGIAKYESPS PQISFGIGHY ASGTDRLSVL
ARTFQRVVTV IPNEVKPRVY GMAQQDLRSQ MAGLLKQRLG TQFEVIHQDE DCYRVVDGST
VHTFDVNYDN LKVASSVVSA SYVNLATAQL NLSSSMSDLL MFNKLRPREQ LGLAILVPSK
NTLPSASVYA WEKWWENMSY KLKESELMLL AEADQPEILA EIMQDWYVSD IC