Gene Daci_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2272 
Symbol 
ID5747835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2499715 
End bp2500575 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content70% 
IMG OID641297356 
Productalpha/beta hydrolase fold 
Protein accessionYP_001563297 
Protein GI160897715 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0854176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGG CCCGGCCCGC GCTGCGGGCC GACAGCGACG CGGGCACGGA ATCGGCACCG 
CTGCCCGTGG TCTTCTCGCA TGCCAACAGC TTTGCGCTGC CCACATACCG GCTGCTGTTC
TCGCTGCTGG CCGAGCGCGG CATCGCGGCG CAGGGCGTGG AGCGCTTCGG CCATGACCCG
CGCTTTCCCG TCACCAACAA CTGGCCGCAC CTGGTCGAGC AACTGGCCGA GTTCACGCGC
GCCGAGGTCG AGCGCGTGGG CGGCCCGGTC TTTCTGGTCG GGCATTCGCT GGGCGGTTTC
CTGAGCGTGA TGACGGCTGC GCGCTACCCC GAACTGGCGC GCGGCGTGCT GCTGATCGAC
TCGCCCCTGC TCAGCGGCTG GCGCGCCAAC GCCGTGGGCG TGGCCAAGCG CACGCAGCTG
GTGGGCTCGG TCTCGCCGGG CAAGATCAGC GCCCGCCGCC GCAATGCCTG GGACAGCGAC
GAGGAGGCGC TGGCCTACTT CCGCGCCAAG AAGGTGTTTG CGCAATGGCA CCCGCAGGTG
CTCCAGGACT ATGTGCAGGG CGGCCTGACC GACCTGGACG GCCGGCGCAC GCTGCACTTC
ACGCGCGAGG TGGAGACCGC CATCTACAAC ACCTTGCCGC ACAACCTGGC CTCGCTGCTG
CACCACCATC CGCTGCGCTG CCCGGCGGCC TTCATCGGCG GGCGTGCCTC CGTGGAGATG
CGCCAGGTGG GCATGGACCT GACGCGCCGC ATCACGCGCG GGCGCGTGAT GATGCTGGAT
GGCAGCCACC TGTTCCCCAT GGAGCGGCCC CACGCCACGG CCGCCGCCAT CGAGGCCTCG
CTGCTGAACA TGCAAACCTG A
 
Protein sequence
MNAARPALRA DSDAGTESAP LPVVFSHANS FALPTYRLLF SLLAERGIAA QGVERFGHDP 
RFPVTNNWPH LVEQLAEFTR AEVERVGGPV FLVGHSLGGF LSVMTAARYP ELARGVLLID
SPLLSGWRAN AVGVAKRTQL VGSVSPGKIS ARRRNAWDSD EEALAYFRAK KVFAQWHPQV
LQDYVQGGLT DLDGRRTLHF TREVETAIYN TLPHNLASLL HHHPLRCPAA FIGGRASVEM
RQVGMDLTRR ITRGRVMMLD GSHLFPMERP HATAAAIEAS LLNMQT