Gene Daci_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2271 
Symbol 
ID5747834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2499135 
End bp2499575 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content63% 
IMG OID641297355 
ProductMarR family transcriptional regulator 
Protein accessionYP_001563296 
Protein GI160897714 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0738352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAG CACTCCAGCA GAATTTTCTG ATGCAGCAGT TGGGCCACTG CACGCGCCTG 
GCCCATGCCA CCGTAAGGCC TCACTACGCG AAGCACATGC TGGCGCTGGA TCTCAAGCCG
TCGGAGTTTG CCGTGCTGTC GCTGATCTCG GCCAATCCCG GGGCGTCCCA GCGCCAGATC
GCCGAGACCG TGATGATTTC CCAGCCCAAT ATGGCGGCGC TGATGGAAAG ACTGCAGGTG
CGCGGCTTGC TCAGGCGCGA GGCCGATCCT GCGGACAGGC GCCTGTCGCT GCTGTATCTG
ACGGCCGAGG GCGAACGCCT GCACGAGGAG GCGGCGGCGC AGGTGGAAAT TCTGGAGCAA
GAGGCCAGCC GCATGCTGAG CGCTGAGGAC AAGCAGCAGC TGCTGCGCCT GCTTCACAAG
ATGATCGATT GCGCCGGGTA G
 
Protein sequence
MKSALQQNFL MQQLGHCTRL AHATVRPHYA KHMLALDLKP SEFAVLSLIS ANPGASQRQI 
AETVMISQPN MAALMERLQV RGLLRREADP ADRRLSLLYL TAEGERLHEE AAAQVEILEQ
EASRMLSAED KQQLLRLLHK MIDCAG