| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2266 |
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| Symbol | |
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| ID | 5747829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2491762 |
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| End bp | 2493936 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297350 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001563291 |
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| Protein GI | 160897709 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.238084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.145177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCA TGCCCTCCAT CCGCCCGATT TCCCTGGCCG TTCTCTGTCT GTGCAGCCAG
CAGGCCCTGA TTGCCCAGAC CCGGGGCGGC GAGCCCGTGC TGGAGGCCGT GACGGTGGAG
GCCAGTGCCG ACGCATCGGC CCAGGGCCTG TCCAAGCCCT TCGCAGGCGG CCAGGTGGCC
ACGGGCGCGC GCAACGGCGT GCTGGGCACG CTGGACTGGA AGAACTCCTC GTTCTCTACC
ACCAGCTATA CGCAGCAGCT GATCGAAGAC ACCCAGTCCA AGAGCGTGGG CGACGTGCTG
CTCAACGATC CGGGCGTGCG CCAGGCGCGC GGCTTCGGCA ACTTCCAGGA GCTGTATGTG
CTGCGCGGCT TCCCGGTGTA CTCGGACGAC ATCGCCTACA ACGGCCTGTA CGGCCTGCTG
CCGCGCCAGT ACATCGCCTC GGAGTTCTTC GAGCGCGTGG AGGTGCTGCG CGGCGCCAAC
GCCTTCCTCA ATGGCGCGGC ACCGGGCGGC AGCGGCATTG GCGGCACCAT CAGCCTGCTG
CCCAAGCGCG CCGGCAACGA TGCACTGACG CGCGTGGGCG CCGGCATCCA GACGGGCGGC
CAGGCCTTTG TCTCCACCGA CATCTCGCGC CGCTTCGGCC CTGACCAGAG CACCGGCATC
CGCCTGAACG CCGTGCGCCG CGACGGCGGC ACGGGCGTGG ATGGCGAAGA CCGCTCGCTC
ACCGCCCTGG GCGTGGGCCT GGACTGGCGC AGCCGCAACG TGCGCCTGTC GGGCGACGTG
GGCTACCAGC GCAACAGCTA CAACGGCGGC CGCCCCAGCG TGACGCCCGG CAACTTCATC
CCGGCCGTGC CCGACAACAA GACCAACTAC GGCCAGAACT GGTCGTACTC CACCGAGCGC
GACCTGTTCG CCACGCTGCG TGCCGAATGG GACATCAACG ACACGACCAC GGCCTGGGCC
GCAGGCGGCC TGCGCCGCGG CAAGGAAGAC AACTCCCTGA GCGGCGTGAC CGTGAGCAAT
GCGGCCGGCG ACACCACGGG CACGCGCTTC GACAACAAGC GCAAGGACAG CGTGGGCACG
GGCGAGGTCG GTATCCGCAC GCGCCTGGCC ACGGGCAGCG TGGGCCACGA GCTGGTGGCC
ACGGCCAGCA CCTACTCGGC CACCGAGCGC AATGCCTGGG GCATGGGCTT TGGCGTGGTC
AACAACATCT ACAACCCCTG GAGCAGCGCG CGCCCGGTGA TGACGCTGTT CGGCGGCAAC
CTGGCCGATC CCACGCGTGC GGGCGAAACC CAACTCAACA GCTTCGCCAT CGGCGACACG
CTGACGATGC TGGACGAGCG CCTGCGCCTG ACCGTGGGCG TGCGCCGCCA GAGCATCGAG
CAAAGCAGCT ACGACTACAA CACGGGCGCG CAGACCGACA ACTACAAGAA GTCGGCCACC
ACGCCCATGC TGGGCCTGGT GTTCAAGACC AGCGAGAACA CCTCGGTCTA CGCCAACTAC
ATCGAAGGCC TGACCAAGGG CGCCGTGGCG CCGCAGACGG CCAACGACCT GCCCGTGTCC
AACGGCGGCC AGGTGTTCGC GCCCTACAAG TCGCGCCAGA AGGAAATCGG CTTCAAGTGG
CAGGGCCGGC AGCTGGGCGC CACGGTGGCG CTGTACACCA CGGACATGCC TTCGGCCTAT
GTGGCCAACC AGGTCTTCGG CCAGTACGGC AAGCAGCGCA ACAGCGGCCT GGAGGCCACG
GTCTTCGGCG AACCCGTCAA GGGCCTGCGC GTGCTGGGCG GCGTGACCTT CAGCGAGGCC
AAGATCCGCG AGGCCGCCGA TGCCACCACC ATCGGCAACT ACGCCATCGG CGTGCCCAAG
CGCCTGCTCA ACCTGGGCGT GGACTGGGAT GTGCCCGGCG TCTCGGGCCT GGCCCTCAAT
GCGCGCGTGA TGCACACCTC CAGCCAGTAC GCCAACGGCG CCAACACGCT GAAAGTGGCC
TCCTGGACGC GCACCGACAT CGGCGCGCGT TATCTCATGG ACATCGGCAA CAACCGCCTG
CTGACCCTGC GCGCGCGCAT CGACAACCTG TTCGACAAGG GCTACTGGTC GTCCGTGGGC
GGCTACCCGG GCGCCAACTA CCTGGTGCAG TCCATGCCGC GCACCTTCTC GCTGAGCGCA
TCGGTGGATT TCTGA
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| Protein sequence | MILMPSIRPI SLAVLCLCSQ QALIAQTRGG EPVLEAVTVE ASADASAQGL SKPFAGGQVA
TGARNGVLGT LDWKNSSFST TSYTQQLIED TQSKSVGDVL LNDPGVRQAR GFGNFQELYV
LRGFPVYSDD IAYNGLYGLL PRQYIASEFF ERVEVLRGAN AFLNGAAPGG SGIGGTISLL
PKRAGNDALT RVGAGIQTGG QAFVSTDISR RFGPDQSTGI RLNAVRRDGG TGVDGEDRSL
TALGVGLDWR SRNVRLSGDV GYQRNSYNGG RPSVTPGNFI PAVPDNKTNY GQNWSYSTER
DLFATLRAEW DINDTTTAWA AGGLRRGKED NSLSGVTVSN AAGDTTGTRF DNKRKDSVGT
GEVGIRTRLA TGSVGHELVA TASTYSATER NAWGMGFGVV NNIYNPWSSA RPVMTLFGGN
LADPTRAGET QLNSFAIGDT LTMLDERLRL TVGVRRQSIE QSSYDYNTGA QTDNYKKSAT
TPMLGLVFKT SENTSVYANY IEGLTKGAVA PQTANDLPVS NGGQVFAPYK SRQKEIGFKW
QGRQLGATVA LYTTDMPSAY VANQVFGQYG KQRNSGLEAT VFGEPVKGLR VLGGVTFSEA
KIREAADATT IGNYAIGVPK RLLNLGVDWD VPGVSGLALN ARVMHTSSQY ANGANTLKVA
SWTRTDIGAR YLMDIGNNRL LTLRARIDNL FDKGYWSSVG GYPGANYLVQ SMPRTFSLSA
SVDF
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