| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2256 |
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| Symbol | |
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| ID | 5747819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2477561 |
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| End bp | 2479177 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297340 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001563281 |
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| Protein GI | 160897699 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0589481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC TGTCAAGCAG CCCCTTTGTT GCAGATGCCC ACGGCGTACG CCAGCGCGGC
CGGGTACGGC CCGCCCTGAT GTGGGGCGTG GTGGCACTGG CCCTGGTGGC GGGGGGCGGG
CTGTGGTGGT GGAACAAGCG GGCGCCGGCC CAGGGCGAGC AGGCCTCGGC CGGTGCGCCC
GGCCCGGGTG GCGGGCGTGC GGGAGGCGGC CGGCGCGGCC CCGGCGGGCC GGGTGGGCCT
GGCGGCCCCG GCGCCATGGG TGCCCAGGCG CAGCCGGTGT CCGTGGGCGT GGTGGAGCGG
CGCGACATGC GCGTGCTGAT CAGCGCCATC GGCACCATGA ACCCGCGCGC CACGGCCGTG
GTGCGCGCCA AGGTGTCGGG CGAGTTGCTG CGCCTGCATT TCAAGGAAGG CGACGAGGTC
AAGGCCGGCC AGCTGCTGGC CGAGATCGAT CCGCGCAGCT TCCAGGCCAG CTTCAACCAG
ATCCAGGGCA CGCTGCAGCG CGACCAGGCG CTGCTCAAGA ACGCCCAGCT GGACCTGCAG
CGCTACAAGG AGCTGCAGGC ACAGGATTCC ATTGCCGGCC AGCAGGTCGA TACCCAGGCT
GCGCTGGTGC GCCAGTACCA GGGCACGGTG GCCGCCGACC AGGCCCAGGC CGATGCGGCC
AAGCTGCAAC TGAGCTACAC GCGCATCACG GCGCCCATTG CGGGCCGGCT GGGCCTGCGC
CAGGCCGACC GGGGCAATGT GGTCAATCCT TCGGATGCCA ACGGCATCGT CACCATCACC
CAGGTCAAGC CCATCGATGC GGTGTTCTCC GTGCCCGAGG CCCATGTGGG CACGCTGGCG
CGGCGCCTGG CCGAAGGGCG CGAGCTGCCC GTGGAGCTGT GGGACCGGGA CCTCAAGCAG
CAACTGGGGC GCGGCCGCCT CAATGCGGTG GACAACAGCA TCGACATCGC CACCGGCACC
ATCAAGGCCA AGGCCGCTTT CGACAATGCC GAGGGCCGGC TGTTCGCCAA CCAGTTCGTC
AACGTCAAGC TGGAAGTGGA CCGGCTGGAG CAGGCGCTGA CCGTGCCGAC CACGGCCGTG
CAGAACAACT ACGTCTACCT GGTCCAGGAG GATGGCACGG TGACGCAGCG GCGCATCGCC
GTGGGCGTGA CCGATGGCGA CCGCGTCAGC GTCAAAGGCG AGCTCAAGCC TGGCGAGCAG
GTGGTGGTGG ACGGCATTGA CCGCCTGCGC GAAGGCGCCA AGGTCACGGT GATCGAGCCC
GACAAGGTGC AGAAGGTGGA CCAGGCCGTG CAGGATGCCT CCGGCCAGCC GCGCGGCATG
CGCAACCTGC CGCCCGATGT GCGCGCCAAG CTGGCGACCA TGAACCCCGA CGAGCGCAAG
GCCTACCTGC AGAAGCTGCG TGCCGAGCGC GGTGGGCAGC GCAATGGGGG TAACGGTGGA
AGCGGCGGCA ACGGCGGCAA CGGCGGCAAC GTGACTGCGC CGGCGGCCGA AGGCTCCGCA
TCCGCAGGCC AGTCGCCGGC ACCGTCGCCC GGATCGCCCC AGCCTTCGCC CGGCCCGGCG
CCTGCCACGC CCTCTGCGCC TGCTGCCCCG GCGGCTCCCG CTCCGGCCGG GCGCTGA
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| Protein sequence | MKRLSSSPFV ADAHGVRQRG RVRPALMWGV VALALVAGGG LWWWNKRAPA QGEQASAGAP
GPGGGRAGGG RRGPGGPGGP GGPGAMGAQA QPVSVGVVER RDMRVLISAI GTMNPRATAV
VRAKVSGELL RLHFKEGDEV KAGQLLAEID PRSFQASFNQ IQGTLQRDQA LLKNAQLDLQ
RYKELQAQDS IAGQQVDTQA ALVRQYQGTV AADQAQADAA KLQLSYTRIT APIAGRLGLR
QADRGNVVNP SDANGIVTIT QVKPIDAVFS VPEAHVGTLA RRLAEGRELP VELWDRDLKQ
QLGRGRLNAV DNSIDIATGT IKAKAAFDNA EGRLFANQFV NVKLEVDRLE QALTVPTTAV
QNNYVYLVQE DGTVTQRRIA VGVTDGDRVS VKGELKPGEQ VVVDGIDRLR EGAKVTVIEP
DKVQKVDQAV QDASGQPRGM RNLPPDVRAK LATMNPDERK AYLQKLRAER GGQRNGGNGG
SGGNGGNGGN VTAPAAEGSA SAGQSPAPSP GSPQPSPGPA PATPSAPAAP AAPAPAGR
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