Gene Daci_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2254 
Symbol 
ID5747817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2475686 
End bp2476756 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content71% 
IMG OID641297338 
Producthypothetical protein 
Protein accessionYP_001563279 
Protein GI160897697 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.053952 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACC TGGATGTTCA TGTTCTGCGC CACCTCGCGC AATGGCGCGC TCAGGGCGAG 
CGCGCGCTGC TGGCCACGGT GGTGCGTACC TGGGGCTCGT CGCCCCGGCC CATCGGCTCC
ATCATGGCGC TGGGGGCCTC GGGCGCCGTG GTCGGCTCCG TGTCCGGCGG CTGCATCGAG
GACGACCTGA TCGCCCGCTA CAGCCACGCC TCGGACGCCG ACGCCCTGAG CGACGGCGCG
CCCCGGCTGC TGCGCTACGG CGTCAGCGCC GACGAGGCCC ACCGCTTCGG CCTGCCCTGC
GGCGGCACGC TGGAGCTGCT GCTCGAATTC AATCCCGACG CTGCTGCGCT GCAGCAACTC
GTGCAATGGC TGGACGAAGG CCGCATGGTG CGGCGCACCG TGGACAAGGC CACGGGCCAG
GTCGTCCAGC AGGTCAGCGA CGCGCCCGAG CCGCTGGTGC ATGACGGGCA GCAGGTCGCC
AACAGCTTCG GCCCCGAGTA CCGCATGCTG CTCATCGGCG CAGGCCAGCT GTCCGAATAC
CTGGCCACCA TGGCGCTGTT CAACGGTTTT GCGGTCACCG TCTGCGACCC GCGCGAGGAA
TACAGCCGCC ACTGGAGCGT GGCCGGCGTG CAGCTGTCGC GCGAGATGCC CGACGACCTC
GTGCGCACCA TGCGCGCCGA TGCGCGCACC TGCATCATCG GCCTCACGCA CGACCCCAAG
CTCGACGACC TGGCCCTCAT GGAAGCCCTG GAATCCCCGG CCTTCTACGT CGGCGCCATC
GGCTCGCGCC GCAACACCGC CCTGCGCCTG CAGCGCCTGA GCGAGCACTT CGGCCTGGGC
GACGCGCAAC TGGCGCGCCT GCGCGGCCCC ATCGGCCTGT ACATAGGCAG CAAGACGCCT
CCCGAAATCG CCGTCAGCAT CATGGCCGAG GTCCTGGCCG CCAAGAACGG CGTGGCCCTG
CCGCGCGGCA TGACCGTGGA AGAAGGCAAG CTCGCCGCCG CCCAGCCCCC GCAGCCGCTG
GAGGATGACG GGCCCGAGGG CATCACGCCC CTGGTGTGCG GGGTGGGTTA G
 
Protein sequence
MENLDVHVLR HLAQWRAQGE RALLATVVRT WGSSPRPIGS IMALGASGAV VGSVSGGCIE 
DDLIARYSHA SDADALSDGA PRLLRYGVSA DEAHRFGLPC GGTLELLLEF NPDAAALQQL
VQWLDEGRMV RRTVDKATGQ VVQQVSDAPE PLVHDGQQVA NSFGPEYRML LIGAGQLSEY
LATMALFNGF AVTVCDPREE YSRHWSVAGV QLSREMPDDL VRTMRADART CIIGLTHDPK
LDDLALMEAL ESPAFYVGAI GSRRNTALRL QRLSEHFGLG DAQLARLRGP IGLYIGSKTP
PEIAVSIMAE VLAAKNGVAL PRGMTVEEGK LAAAQPPQPL EDDGPEGITP LVCGVG