| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2252 |
|---|
| Symbol | |
|---|
| ID | 5747815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2473357 |
|---|
| End bp | 2474631 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641297336 |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_001563277 |
|---|
| Protein GI | 160897695 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0589481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCTG GGGCAGCCGG TACAGCCGGT GCCGCCGGTG CCGCCGGTGC CGCCGATGGG
GGCGGGCGCA CCAGCTGGCT GGGCGATGCG CGCAGCGGCA AGCTCGCCGG CAACCTGGTC
GGCTTTGCGC GTGCGCTGCG CCGCGCGGGC GTGCCCGTGG ATGGCGGGCG CATGGCGCTG
GCCCAGCAGG CCCTGCCCCT GGTCGGCCTG GCGCGCGAGG ACATGGCCGC CGCGCTGGAG
GCCGTATTTG TGAGCAACGC CCAGGACCGC GCCGTGTTCC GCGAACTGTT CGACGCCTAC
TTCCGCAATC CCGACGTGGC CAGGCAACTG CTGGCCCAGT TGCTGCCGCA GGCGCCCCGG
CCGTCCGCGC CGCGCCACCG CCCGCGCGTG CAGGAAGCCT TGTCGCCCCG CCAGGCAGGC
GAGGGCAGGG CCGCCGTCGA TGAAGAGCTG AAGCTGGACG CCGCCATGAC GGCCAGCGAG
CGCCACCGCC TGCGCCATGC CGACTTCAAC CAGCTCAGCG CCAGCGAATA CCTGCTGGTG
CAGCGCCTGG CCAGGGACAT TGCCCTTCCC TTGCCCCGCT ACCGCAGCCG CCGCACGCGC
ACGGGCCAGC GCGGCGCGGT GCCTGACTGG GCTGCCAGCC TGCGTGCGGC ATCGCACCAT
GGCGGCGAAA TGCTGCAGCT GCTGCGGCGC GAACGGCGGC GCCTGCCGCT GCCCTGGCTG
GCCCTGGTCG ATGTCTCGGG CTCCATGGAG CGCTATGCGC GGCTGTTGCT GGCCTTCCTG
CACGCGGCCA CCAGCACGCA GCGCCATGCG GGCCTGCGCC GCCAGGTCTT CAGCTTCGGC
ACCGAGCTGC GCAACCTGGG CCCGGCCTTT GCCCAGGCCG ATGCCGACGC CATGCTCGAG
CGCGCCAACG CCGCCATTGC CGACTTTGGC GGCGGCACGC GCCTGGGCAG CAGCCTGGGC
GAACTGCGCC GCCTGCATGC GCGCCACCGG GTTTCAGGCC TGGTGGGCCG GCGCACCCTG
GTGCTCATCA TCAGCGACGG CCTGGACACC GGCGATGCCG CCGAGCTGGA TCGCGAACTG
GCCTGGCTGC GCCGCCACAG CGCGCGGCTG CTGTGGCTCA ACCCGCTGCT GCGCTTTGAC
GGGTATGCCC CACTGGCCCA GGGGGCGGCC GTGCTGCATC GTCATGCCCA TGCCATGCTT
GCGGTACACA ACCTGGAATC GCTGCAGCAG CTGGCCGGTC ACCTGGCGCG GCTGCTGGCG
GCGCCAGGCC GCTGA
|
|---|
| Protein sequence | MTAGAAGTAG AAGAAGAADG GGRTSWLGDA RSGKLAGNLV GFARALRRAG VPVDGGRMAL
AQQALPLVGL AREDMAAALE AVFVSNAQDR AVFRELFDAY FRNPDVARQL LAQLLPQAPR
PSAPRHRPRV QEALSPRQAG EGRAAVDEEL KLDAAMTASE RHRLRHADFN QLSASEYLLV
QRLARDIALP LPRYRSRRTR TGQRGAVPDW AASLRAASHH GGEMLQLLRR ERRRLPLPWL
ALVDVSGSME RYARLLLAFL HAATSTQRHA GLRRQVFSFG TELRNLGPAF AQADADAMLE
RANAAIADFG GGTRLGSSLG ELRRLHARHR VSGLVGRRTL VLIISDGLDT GDAAELDREL
AWLRRHSARL LWLNPLLRFD GYAPLAQGAA VLHRHAHAML AVHNLESLQQ LAGHLARLLA
APGR
|
|---|
| |