Gene Daci_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2250 
Symbol 
ID5747813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2471622 
End bp2472413 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content72% 
IMG OID641297334 
Productcarbon-monoxide dehydrogenase (acceptor) 
Protein accessionYP_001563275 
Protein GI160897693 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.158246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAT TCACCTATGA AGCCCCAGGC ACCACGGCCG ACGCCGCCGC GCTGGCCGCG 
CAGGGCGGCC AGTACCTGGC CGGCGGCCAG AGCCTGCTGC CATCGATGCG CCTGCGCCTG
GCGCGGCCCG AACAGATCGT GGACCTGAAC CGCGTCCAGG GCCTGGCCGG CATTGCCGTC
GACGGCCAGA CCGTGGAAAT CCGCGCCATG ACGCGCCATG CCGACGTGGC CGCCAACCCG
CAGGTCCAGG CCGCCATCCC GGCCCTGGCC GAGCTGGCCG GCGGCATCGG CGACCGCCAG
GTGCGCGCGC GCGGCACCAT CGGCGGTTCG CTGGCCAACA ACGACCCCGC TGCCTGCTAC
CCCAGTGCCG TGCTGGGCCT GGGCGCCACC GTCGTCACCG ACCGGCGCGA GATCGCGGCC
GACGACTTCT TCCAGGGCAT GTACACCACG GCGCTGGGCA GCGGCGAGCT GATCACGGCC
GTGCGCTTTC CCGTGCCGAA GAAGGCCGCC TACCTCAAGT TCAAGCAGCC CGCCTCGCGC
TTCGCCCTGG TGGGCGTCTT CGTCGCCCAG ACCGACAGCG GCGTGCGCGT GGCCATCACG
GGCGCCGGGC TCAGCGTGTT CCGCCATGCG GGGCTGGAGG CCGCGCTCAA CCAGAGCTTC
ACGCCCGACG CGGCCGCCCA GGTGCTGATC GACCATGCCG ACCTCAACAG CGACCTGCAT
GCCAGCGCGC GCTACCGGGC GCAGTTGATC AGCGTGCAGA CGCAGCGTGC GGTATCGCAG
ATGCTGGGGT GA
 
Protein sequence
MYAFTYEAPG TTADAAALAA QGGQYLAGGQ SLLPSMRLRL ARPEQIVDLN RVQGLAGIAV 
DGQTVEIRAM TRHADVAANP QVQAAIPALA ELAGGIGDRQ VRARGTIGGS LANNDPAACY
PSAVLGLGAT VVTDRREIAA DDFFQGMYTT ALGSGELITA VRFPVPKKAA YLKFKQPASR
FALVGVFVAQ TDSGVRVAIT GAGLSVFRHA GLEAALNQSF TPDAAAQVLI DHADLNSDLH
ASARYRAQLI SVQTQRAVSQ MLG