| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2249 |
|---|
| Symbol | |
|---|
| ID | 5747812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2469221 |
|---|
| End bp | 2471611 |
|---|
| Gene Length | 2391 bp |
|---|
| Protein Length | 796 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641297333 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
|---|
| Protein accession | YP_001563274 |
|---|
| Protein GI | 160897692 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.12699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCAT CCGACTTTTC CAAGCTCCCC CACATCGGCG AGCCCGTCAA GCGCAAGGAG
GACTACCGCT TCCTCACGGG CGCGGGCCAG TACACCGACG ACATCGCGCT GGCCGCCCAG
GCCCATGCGG TGTTCGTGCG CTCGCCGCAC GCGCATGCGC GCGTGCGCTC CGTTTCCACC
GATGCGGCCA AGGCCGCGCC CGGCGTCATC GGCGTGCTCA CGGGCGCCGA CGTGGCGGCC
GACAAGATCA ACGGCCTGCC CTGCGGTTGG CTGATCACCA GCACCAACGG CGAGCCCATG
AAGGAGCCGC CGCATCCCAT CCTGGCGCTG GACACCGTGC GCTACGTGGG CGACCAGGTC
GCCATGGTCG TGGCCGAGAC GCTGGAGCAG GCGCGCGACG CGGCCGAGCT GGTGGAGGTG
GACTACGACC CGCTGCCCGC CGTGGTGCTG GTGGCCGACG CGGCGGCCGG CAGCGTGCCC
GGCGCGGTGG TGCATGACAT CGCCCCCGAC AACCACTGCT ACAAATGGGC CATCGGCGAC
AAGGCCGCCG TGGATGCCGT GTTTGCGGGC GCCGCCCACA TCGCCCAGCT GGACCTGGTC
AACAACCGGC TGATTCCCAA CGCCATGGAG CCGCGCGCGG CCATCGGCAG CTACAGCCGC
GCCAATGACG AGTACACGCT GTACGTGGCC AACCAGAACC CGCACGTCGA GCGGCTGCTG
ATGACGGCCT TCGTCATGGG CCTGCCCGAG CACAAGGTGC GCGTGATCGC GCCCGACGTG
GGCGGCGGCT TCGGCTCCAA GATCTTCCTG TATGCCGAGG ATGTCTGCCT GACCTGGGGT
GCGCGAAAGC TCAACCGCAA CATCAAGTGG ACGGCCGACC GCAGCGAGTC CTTCCTCACC
GACGCCCATG GCCGTGACCA CGTCAGCCAT GCCGAGATGG CCATGGACGC CAGCGGCAAG
TTCCTGGCCA TGCGCGTGCA CACGGATGCC AACCTGGGCG CCTACCTGAG CACCTTCGCC
AGCGCCGTGC CCACCATCCT CTATGCCACC CTGCTGGCGG GCCAGTACGC CACACCCCAG
GTCTATGTGG AGGTCGATGC CTGGTTCACC CACACCGCCC CCGTCGATGC CTACCGGGGC
GCGGGCCGGC CCGAGGCCAC CTACCTGCTG GAGCGCCTGG TCAGCCGCTG CGCCTGGCAA
CTGAACCTGT CGCAGGCCGA GATACGGCGG CGCAACTTCG TCACCAGCTT TCCCTACCAG
ACGCCCGTGG CCCTGCAGTA CGACGTGGGC GACTACGGCG CATGCATGGA CAAGGCCGAG
GCCCTGGCCG ACGTGGCCGG CTTTGCCGCG CGCCGTGCCG ACAGCGAGGC GCGGGGCCTC
AGGCGCGGCC TGGGCTACAG CAGCTACATC GAGGCCTGCG GCCTGGCGCC CAGCAACATC
GCGGGCGCCC TGGGCGCGCG GGCCGGCCTG TTCGAATGCG GCGAGGTGCG CGTGCACCCC
ACGGGCAGCG TCACCGTGTT CACGGGCTCG CACAGCCACG GCCAGGGGCA CGAGACCACC
TTCGCCCAGG TGGTGGCCGC GCGCCTGGGG ATACCCGTGG AGAACGTGGA CATCGTCCAC
GGCGACACGG GCCGTGTGCC CTTCGGCATG GGCACCTATG GCTCGCGCTC CATCAGCGTG
GGCGGCGCGG CCATCATGAA GGCGCTGGAC AAGATCGAGG CCAAGGCCAA GAAGATCGCG
GCCCACCTGA TGGAGGCCAG CGACGCCGAC ATCGACTTCG CGGACGGCGA GTTCACGGTG
CGCGGCACCG ACAAGAAAAT CCCCTTCGCC CAGATCGCGC TCACCGCCTA TGTGCCGCAC
AACTACCCGC TGGACAAGCT GGAGCCCGGC CTCAACGAAA CCGCCTTCTA CGACCCCACC
AACTTCACCT TCCCCGCAGG CACCTACATC TGCGAGGTCG AGGTGGACCC GGCCACGGGC
GTGGTGCGCG TGGACCGCTT CAGCGCCGTG GACGACTTCG GCACCATCAT CAATCCCATG
ATCGTCGAGG GCCAGGTGCA CGGCGGCGTG GCCCAGGGCA TAGGCCAGGC GCTGCTGGAA
AACTGCGTCT ACGACCGCGA GACCGGCCAG CTGCTCACCG GCAGCTTCAT GGACTACGCC
ATGCCGCGCG CCGACGACTT CCCCGAATTC AAGCTCGGCA CCGTCTGCAC GCCCTGCACG
CACAACCCGC TGGGCACCAA GGGCTGCGGC GAGGCGGGGG CCATAGGCTC GCCGCCCGCC
GTCATCAATG CCGTGCTCGA CGCACTGCAT CCCCTGGGTG TCAGGGACCT GGACATGCCG
GCCAGCCCGC ACCGTGTCTG GTCGGCCATC GACGCCGCAG CCACCTCCTG A
|
|---|
| Protein sequence | MGASDFSKLP HIGEPVKRKE DYRFLTGAGQ YTDDIALAAQ AHAVFVRSPH AHARVRSVST
DAAKAAPGVI GVLTGADVAA DKINGLPCGW LITSTNGEPM KEPPHPILAL DTVRYVGDQV
AMVVAETLEQ ARDAAELVEV DYDPLPAVVL VADAAAGSVP GAVVHDIAPD NHCYKWAIGD
KAAVDAVFAG AAHIAQLDLV NNRLIPNAME PRAAIGSYSR ANDEYTLYVA NQNPHVERLL
MTAFVMGLPE HKVRVIAPDV GGGFGSKIFL YAEDVCLTWG ARKLNRNIKW TADRSESFLT
DAHGRDHVSH AEMAMDASGK FLAMRVHTDA NLGAYLSTFA SAVPTILYAT LLAGQYATPQ
VYVEVDAWFT HTAPVDAYRG AGRPEATYLL ERLVSRCAWQ LNLSQAEIRR RNFVTSFPYQ
TPVALQYDVG DYGACMDKAE ALADVAGFAA RRADSEARGL RRGLGYSSYI EACGLAPSNI
AGALGARAGL FECGEVRVHP TGSVTVFTGS HSHGQGHETT FAQVVAARLG IPVENVDIVH
GDTGRVPFGM GTYGSRSISV GGAAIMKALD KIEAKAKKIA AHLMEASDAD IDFADGEFTV
RGTDKKIPFA QIALTAYVPH NYPLDKLEPG LNETAFYDPT NFTFPAGTYI CEVEVDPATG
VVRVDRFSAV DDFGTIINPM IVEGQVHGGV AQGIGQALLE NCVYDRETGQ LLTGSFMDYA
MPRADDFPEF KLGTVCTPCT HNPLGTKGCG EAGAIGSPPA VINAVLDALH PLGVRDLDMP
ASPHRVWSAI DAAATS
|
|---|
| |