| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2246 |
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| Symbol | |
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| ID | 5747809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2466495 |
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| End bp | 2467103 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641297330 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001563271 |
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| Protein GI | 160897689 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.417251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0283707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCTT TGCTCAAATT CTCAAGGGGG GTCGACTGGC TCAACAGCCT GGTCGGGCGA
TGGCTTATCT GGCTGATCCT GGCCTCCACG GTCATCAGCG GCATCAATGC CATCGTTCGC
AAGGTGTTGC ACACCAGCTC GAACGCCTAC CTCGAAGTGC AGTGGTACCT GTTCGCGGCC
TCCTTCCTGC TGGCCGCCGG CTACACGCTG CTGCAGGGCG AGCATGTGAA GGTGGATGTG
ATCGCCAGCC GCCTGTCCAA GCGCACGCAG ATCTGGATCG ACATCTTCGG CTTCGTCTTC
TTCCTGACCC CCATGGCGCT GGCCATCCTG TGGTTCGGCA CGCCCTTCGT GATCCAGGCC
ATGCAGACCG GCGAGATGTC GGGCAACGCA GGCGGCCTGG TGCGCTGGCC CGTCTACCTG
ATGATCCCCA TCGGCTTCGG GCTGCTGCTG CTGCAGGGCA TGTCGGAGCT GATCAAGCGC
ATCGCCTTCC TGAAGGGCCT GATCGACGAT CCCACGGCCA AGAAGGGCGA GAAGACCGCC
GAGGAAGACC TGGCCGAAGC ACTGCGCGGG CTGGCAGGTG CCAAGGACAA AAGCGGGCAA
AGCGCCTGA
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| Protein sequence | MQALLKFSRG VDWLNSLVGR WLIWLILAST VISGINAIVR KVLHTSSNAY LEVQWYLFAA
SFLLAAGYTL LQGEHVKVDV IASRLSKRTQ IWIDIFGFVF FLTPMALAIL WFGTPFVIQA
MQTGEMSGNA GGLVRWPVYL MIPIGFGLLL LQGMSELIKR IAFLKGLIDD PTAKKGEKTA
EEDLAEALRG LAGAKDKSGQ SA
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