| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2235 |
|---|
| Symbol | |
|---|
| ID | 5747798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2453595 |
|---|
| End bp | 2454137 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641297319 |
|---|
| Product | transcriptional activator FlhC |
|---|
| Protein accession | YP_001563260 |
|---|
| Protein GI | 160897678 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.896316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0400071 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC CCGCCAAAAG TGTCCTGAAC GAGTCCAAGC AGATCGAGCG CGCCGCCATG
CTCATCGAGA TGGGTGCACG CATGCAGGTG CTCGAATCCG AGACCACGCT GTCCTACGAG
CGCCTGATCC GCCTGTACAA GGAGATCGCC GGCAAGTCGC CTTCCAAGGG CCAGCTGCCG
TTCTCGACCG ACTGGTTCCT GACCTGGCAG GAGAACATCC ACAGTTCGCT GTTCCTCAAT
ATCTACGAAT ACCTGTCCAA GGGCGCCGAG CTGGATGCCG TTGAACAATT GACCAAGGCC
TACCGTCTCT ATACCGAGCA GATCCAGGCC GCCGAGCTGG AAGCGCTGCT GTCCTTCACC
CGCGCATGGC GCCTGGTGAA GTTCGTCGAC GCGCAGATGC TGACCCGCAC CCAGTGCACG
GTGTGCAAGG GCCAGTTCGT GACCGAGCCC TACGAGAACG AGCGCCACTA CCAGTGCGGC
CTGTGCAATC CGCCCGCACG CGCCGGCAAG AGCAAGAGCG CCGGCTCGCT GATGCTGCAC
TGA
|
|---|
| Protein sequence | MSTPAKSVLN ESKQIERAAM LIEMGARMQV LESETTLSYE RLIRLYKEIA GKSPSKGQLP
FSTDWFLTWQ ENIHSSLFLN IYEYLSKGAE LDAVEQLTKA YRLYTEQIQA AELEALLSFT
RAWRLVKFVD AQMLTRTQCT VCKGQFVTEP YENERHYQCG LCNPPARAGK SKSAGSLMLH
|
|---|
| |