| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2234 |
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| Symbol | |
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| ID | 5747797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2451435 |
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| End bp | 2453543 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297318 |
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| Product | EAL domain-containing protein |
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| Protein accession | YP_001563259 |
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| Protein GI | 160897677 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1455] Phosphotransferase system cellobiose-specific component IIC
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00410] PTS system, lactose/cellobiose family IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0455716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAACA AGACGTCACG GGCCGGCTTT CCGGGCGTGC AACTGTTCCT GACACAGCGC
CTGGCCAGGC TGGCCGGCGC CAACTCCATG CGGGCCATAC GCGAGGGCCT GCTCTGGCTG
GTTCCCTGTC TGCTGGTCTC GGCCCTGTTC CTCATCCTGT CGGCGCTGGC GCAGATGTCC
GGCCAGCCCG AACCCGTGGT GCGGGTGCTT GCGGGCCTGC ACGCGGAGAT CGGCAGCATC
CTGCCGCTGC TGGTGGCCGC GTCCATCGGC TACATGCTCT CAATACGCCA CCGGCTGCCG
CGCCTGCCGG TGACCTTTCT GTGCTTCGCG CATGTGCAGA TGGCCATTTA TCTGCTGAGC
GAGCATCCGC GCGCGGCGGC CACCCTGGTG CTGTTCATCT CCATCGCCTC CCCCCTGATC
ACCGTGCCCC TGATGGCGCG CCTGAGCCGG CTGCGCTGGA CGCGCATCGC GCGCACCGGC
TTCGTGAGCG AGAACGTGCG CGAGGTCATG AACCTCGTCG TTCCCGGCGC CCTTGTCGCC
GTGCTGCTCG TGCTGCTGCT GCTGGGCCTG CAACAGGTGC TGCCGGATAT CACGCGGGCC
GAACTGCCGC TGGCCATCGC GGGCCCCGAG AACCCCTACC GCAGCGGGCT CACGCTGGCA
CTGCTCAATT CCGTGCTCTG GTTCTTCGGC GTCCAGGGGT ACTACGCCAT GCAGCCCTTC
TTCCAGGTGC TGGACCAGGC GGTGGTGGCC AATGCCGCCG CGATGGCGCA GGGGCTGCAG
GCGCCCTGGG CGCTCAGCGG CGGGCTGATG GGCTCCTTCG TCTTCATCGG CGGCTCCGGT
GCAACGCTGT CGCTGGCGCT GGCCGTGCTG CTGTTTTGCC GGGGGCGGGG CCTGCGCGTG
CTGGCGCTGG CGGCGCTGCC CATCTCCTTG CTCAACGTCA ACGAGATCCT GCTGTTCGGG
CTGCCGATCA TCCTGAACCT GCGCCTGCTC GTGCCGTTTC TCGCGGTACC CGCCATCAAC
CTGGTCGTGG CCGTCACGGT GGTGCAGGCC GGCTGGGTGG CACCGGCCTC CATGGTGCTG
CCGCTGACTG CGCCCGTGGT CTTCAATGCC TATGTGAGCA CGGGCGGGGA CATGGCAGCC
GTGGTACTGC AACTGGCATT GACGGCCCTG GGAGCGCTGA TCTATGCGCC CTACGTGCGG
GCCATCGACC GGCTGGGCCA GGACGACGGT GCCATCGTGC TGCACGCGCT GGACACCACG
TTCTCGCGCC TGCCCGAAGA GGCTGGCCTG ATCGTGCGCG ATCCGCTGGT GCAGGCGCAC
CAGGCGCAGG CCCGGCGCGA GACCATGCTG GCGCATATCC GTCGCATCAG CGAGTACGAG
TTCCACCTGG AATTCCAGCC CCAGGTCTCG CACCGCAGCG GCCTGTGCCT GGGCTGCGAG
GCCCTGCTGC GCGCGCGGGA CGCGCAGGGC CGCTTGCAGC AGCCCGGCAG TTTCCTGCGC
TGGCTGGCCG ATGCGGGGCT GATGCGCGAG GTGGACCTGT GGGTGGCGGG CGCTGCCGTG
CGCCAGAGCC GGCGCTGGCG CCAGGAGGGC TTTGCCATGC CGATCAGCAT CAATGTGTCG
GGTGCGACGT TGACATCGCC CGAATACTGC TCGCGCCTGA TGCTGCTGCT GGCCCAGGCC
AGAGGGCAGG TCGGCGTGGA GATCACGGAG GAAGAAATGG TGGGCGACGT GGAGGCGATC
CGCCGCGCCA TAGGGCAGAT CCATGCGCTG GGCGCCAAGG TGTCCATCGA TGACTTCGGC
ACCGGCTTCT CGTCCATGAG CTACCTGCAC CAGTTCGACG TGGATGCCAT CAAGATCGAC
CGCAGCTTCG TCGTGGCCAG CGGCCATGCC AAGGGCGAGC TGGTGCTGGA CGGCCTGCTG
CGCTTTTGCG AGGCGCTGCA GCTGAACGTG GTGGCCGAGG GCGTGGAGAC CGAGGCGCAG
TTGCAGGCCC TGGGCTTCGA GGGCGAGCTG CTGGTGCAGG GCTGGTACTT CAGCCGCGCC
CTGCCGGGCG AGAAACTGCC GCAGTTCGCC AGGGACTGCG CCGCCAGGGC AGGCGGCGGG
ACGGTCTAG
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| Protein sequence | MGNKTSRAGF PGVQLFLTQR LARLAGANSM RAIREGLLWL VPCLLVSALF LILSALAQMS
GQPEPVVRVL AGLHAEIGSI LPLLVAASIG YMLSIRHRLP RLPVTFLCFA HVQMAIYLLS
EHPRAAATLV LFISIASPLI TVPLMARLSR LRWTRIARTG FVSENVREVM NLVVPGALVA
VLLVLLLLGL QQVLPDITRA ELPLAIAGPE NPYRSGLTLA LLNSVLWFFG VQGYYAMQPF
FQVLDQAVVA NAAAMAQGLQ APWALSGGLM GSFVFIGGSG ATLSLALAVL LFCRGRGLRV
LALAALPISL LNVNEILLFG LPIILNLRLL VPFLAVPAIN LVVAVTVVQA GWVAPASMVL
PLTAPVVFNA YVSTGGDMAA VVLQLALTAL GALIYAPYVR AIDRLGQDDG AIVLHALDTT
FSRLPEEAGL IVRDPLVQAH QAQARRETML AHIRRISEYE FHLEFQPQVS HRSGLCLGCE
ALLRARDAQG RLQQPGSFLR WLADAGLMRE VDLWVAGAAV RQSRRWRQEG FAMPISINVS
GATLTSPEYC SRLMLLLAQA RGQVGVEITE EEMVGDVEAI RRAIGQIHAL GAKVSIDDFG
TGFSSMSYLH QFDVDAIKID RSFVVASGHA KGELVLDGLL RFCEALQLNV VAEGVETEAQ
LQALGFEGEL LVQGWYFSRA LPGEKLPQFA RDCAARAGGG TV
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