Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2232 |
Symbol | hemC |
ID | 5747795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2447432 |
End bp | 2448370 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641297316 |
Product | porphobilinogen deaminase |
Protein accession | YP_001563257 |
Protein GI | 160897675 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.495959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0113482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCA AACCACTTCT CCCCCACTCC ATCGTGATCG CCACGCGCGA GAGCCAGCTG GCACTGTGGC AGGCCGAGCA TGTCCAGGCG CTGCTGCGCG CCCGGGGGCA TGAAGTGGAA TTGCTGGGCA TGACCACCAA GGGCGACCAG ATCCTGGACC GCACGCTGTC CAAGGTCGGC GGCAAGGGCC TGTTCGTCAA GGAGCTGGAA GTGGCGCTGG AAGAAGGACG CGCCCACATC GCCGTGCACT CGCTCAAGGA CGTGCCCATG GAGCTGCCCG AAGGCTTTGT GCTGGCCTGC GTGATGGAGC GCGAAGACCC GCGCGACGCC TTTGTCTCCA ATCGCTACGC CACGCTGGCC GAGCTGCCGC AGGGCGCCGT CGTCGGCACA TCGAGCCTGC GCCGCCAGGC ACTGCTGCAG GCCCTGCGCC CGGACCTGAA GATAGAGCCG CTGCGCGGCA ACGTGAACAC CCGCCTGCGC AAGCTGGACG AAGGCCACTA CGACGCCATC GTGCTGGCCG CCGCAGGCCT GATGCGCCTG GGCCTGGCCG ACCGCATCCG CGCCAGGTTC GAGCCCACCG GCATGCTGCC GGCCGCTGGC CAGGGCGCGC TGGGCATCGA GGTGCGCGCC GACCGCCAGG ACCTGATCGA CGCGCTGGCC CCGCTGGCCC ACCAGACCAC CTGGCTGACC GTGACCGCCG AGCGCGCCGT CAGCCGCTGC ATGGGCGGCA GCTGCTCCAT GCCGCTGGCG GCGCACGGCA CATTCGACGG CCGGCAACTG CGCCTGGACG CAGCCTGGGG AGACCCGCAA GGCCGGCTGC CGCTGGTGCA GGTGCACGCC GATGCCACCG TCACCGACTT CGCCAGCGCC GACGCGCTGG GCCAGCACGT GGCTGCGCTG CTGCAGGCGG CGGGCGCCCA ACCGGCCCCC AAGCTCTAG
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Protein sequence | MNTKPLLPHS IVIATRESQL ALWQAEHVQA LLRARGHEVE LLGMTTKGDQ ILDRTLSKVG GKGLFVKELE VALEEGRAHI AVHSLKDVPM ELPEGFVLAC VMEREDPRDA FVSNRYATLA ELPQGAVVGT SSLRRQALLQ ALRPDLKIEP LRGNVNTRLR KLDEGHYDAI VLAAAGLMRL GLADRIRARF EPTGMLPAAG QGALGIEVRA DRQDLIDALA PLAHQTTWLT VTAERAVSRC MGGSCSMPLA AHGTFDGRQL RLDAAWGDPQ GRLPLVQVHA DATVTDFASA DALGQHVAAL LQAAGAQPAP KL
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