Gene Daci_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2229 
Symbol 
ID5747792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2444143 
End bp2445450 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content73% 
IMG OID641297313 
ProductHemY domain-containing protein 
Protein accessionYP_001563254 
Protein GI160897672 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0303881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0116936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCTG CACTGTGGTT GATCGGTTTG TTCGGCATGG CCGTTGCGGC CGCCTTGTTC 
GCGGGCTCCA ACCAGGGCAC GGTGACCCTG TTCTGGGCGC CCTACCGGCT GGACCTGTCC
CTGAACCTGG CCATTGCCAT CATCGTGCTG GCCTTCGTGC TGCTGTATGC CGCGCTGCGC
GCCCTGGCCG CGCTGCTGCA GATGCCGCAC CAGGCGCGGC GCTGGCGCAG CCAGCAAAAA
GAGCGCGCCA TGCACCACAG CCTGCTGGAA GCCCTGTCGC ACCAGCAGGC CGGCCGCTTC
CTGCGCGCAC GCAAGTCGGC ACTGGCCGCC CTGGCGATGG AGGAATCCCT GGCCGAGGCA
CATGCCGCCG TGCCGCACGG CACGCGGCTG CGTGCGGCTG CCCACATGGT GGCCGCCGAT
GCCTCCCACG CCCTGCAGGA CAGCCCGCAG CGCGACCACC ACTGGCGCGA AGTCCTGGCC
AATGCACCGG CCCAGGGCAA TGCCCAGGAG CAGGAAATGC GCGAAGGCGC CCAGATGCGC
GCCGCGCGCT GGGCCCTGGA CGACCGCGAC GCAGCTGACG CGCTGCGCCG CCTGGCCGAA
CTGCCGCAGG GCGCGGCACG CCGCACGATT GCGCTGCGCA TCCGCCTGAA GGCCTCGCGC
CTGGCCGGCC AGACATCGAC GGCGCTGGAC ACGGCGCGCC TGCTGGCCAA GCACCGCGCC
TTCTCGCCAG CGGCCGCCGC CAGCGTGGTG CGCGGCCTGG TGCTGGAGAG CATCAACGAG
GCACGCGACA CCACGCAGCT GCAGCACTTC TGGCTGTCGC TGGACGGTGA GGAACGTGCC
ATGCCCGAGA TCGCGCTGCC GGCCGCATCG CGCCTCATGG CCCTGGGCGG CGAGGCCGCG
CAGGCCCGCG CCTGGCTGCT GCCCGTGTGG GAACGCCTGC TGTCCCATGC CGGCCCGCGC
AGCGAATCGC ATCTGCCGCG CCTGGTCCAG GTGCTGGAGC CCTGCCTGGA CGGCCTGGAC
GGCACCTGGC TGGCACGCAT CGAGGCGGCC ACCAACAGCC ATCCGCGCGA ACCCCGCCTG
CAATACCTGG CCGGCATGGC CTGCGTGCAG CGCCAGCTCT GGGGCAAGGC CCAGCAACTG
CTGCTGCGCG CTGCGCCCCA TCTGCAGGAA AGCGCACTGC GCACCCGTGC CTGGCAGCGC
CTGGCCCTGA TGGCCGAGCA CCGGGGCGAT GCCGACGCAG CCGCCGCCGC CTGGAAGCAG
GCGGCGCAGG CCGTGGTCAT GCTGCCCGCC GATCCCGCCC GGCCCTGA
 
Protein sequence
MRAALWLIGL FGMAVAAALF AGSNQGTVTL FWAPYRLDLS LNLAIAIIVL AFVLLYAALR 
ALAALLQMPH QARRWRSQQK ERAMHHSLLE ALSHQQAGRF LRARKSALAA LAMEESLAEA
HAAVPHGTRL RAAAHMVAAD ASHALQDSPQ RDHHWREVLA NAPAQGNAQE QEMREGAQMR
AARWALDDRD AADALRRLAE LPQGAARRTI ALRIRLKASR LAGQTSTALD TARLLAKHRA
FSPAAAASVV RGLVLESINE ARDTTQLQHF WLSLDGEERA MPEIALPAAS RLMALGGEAA
QARAWLLPVW ERLLSHAGPR SESHLPRLVQ VLEPCLDGLD GTWLARIEAA TNSHPREPRL
QYLAGMACVQ RQLWGKAQQL LLRAAPHLQE SALRTRAWQR LALMAEHRGD ADAAAAAWKQ
AAQAVVMLPA DPARP