Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2227 |
Symbol | |
ID | 5747790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2442674 |
End bp | 2443246 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641297311 |
Product | YceI family protein |
Protein accession | YP_001563252 |
Protein GI | 160897670 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000482548 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00464038 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCTTTT CCTCCACGCT GACCTCCATC GCCCTGGCCG CTGCGGCCCT GGCTTCCCAA GCGGCACTGG CCGAGCAAAA GCTCGTGCCC GCCCAGAGCG CCGTGAACTT CACGGCCAAG CAGATGGGCG TGCCCCTGCA GGGCCACTTC AAGAAGTTCG ATGCCCAGGT CCAGTTCGAC ACGGCCAAGC CCGACACCAG CAAGATCCGC TTCACCGTGG ACACCGGCAG CGCCACCATG GGCGCCAAGG AAACCGATGC CGAACTGCCC AAGGCGGACT GGTTCAACGT CGCCAAATTC CCGCAGGCCG TGTTCGACTC CACCGCCGTC AAGGCACTGG GCGGCGGCAA GTACCAGGTG GACGGCAAGC TCAGCATCAA GGGCCAGGTC CAGAACGTGA GCATTCCCGT GCAACTGGCC CAGTCCGGCA CCACGACCAC GGCCACCGGC ACGCTGCCGC TCAAGCGCCT GCAATTCAAG ATCGGCGAAG GCGAATGGGG CGATACCTCC ATGGTGGCCG ACGAGGTGCA GGTGCAGTTC AAGCTGGCAC TGACCGGCGT GGGCAAGCTG TAA
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Protein sequence | MRFSSTLTSI ALAAAALASQ AALAEQKLVP AQSAVNFTAK QMGVPLQGHF KKFDAQVQFD TAKPDTSKIR FTVDTGSATM GAKETDAELP KADWFNVAKF PQAVFDSTAV KALGGGKYQV DGKLSIKGQV QNVSIPVQLA QSGTTTTATG TLPLKRLQFK IGEGEWGDTS MVADEVQVQF KLALTGVGKL
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