| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2225 |
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| Symbol | |
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| ID | 5747788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2437524 |
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| End bp | 2441714 |
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| Gene Length | 4191 bp |
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| Protein Length | 1396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297309 |
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| Product | hypothetical protein |
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| Protein accession | YP_001563250 |
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| Protein GI | 160897668 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.142194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00588885 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCAGA TCTCCATTGC CCCCGCCGTT GTCGCCGCCA TTGCAGCCCA TTCATTCCCA
ATGGCTGCCA ATGCCCAGAG CATCACGGTC GCTCCGGCTG CCGCCGTCGC GGCAACCGCG
ATTCCGATGG ACAACCCTTG GAGTCTCTTG GCCCTTGCCA TAGGGCTGGC CATGGCCGCC
TGGCTGGTGC TGCGCAACCG GCAGCACCGG GCGCTCTTCA TGGCGCTGTG CACCAGCGCC
ATCGTGTGCG CCACGCTGTG GCACAGCCCC GATCTGCGTG CCCAATTGAC GGGCAGCTTT
ACCAACCCGG CGGGTGAGAC ACGGCCATTG CTCGTTGCGC AAATTGTCAA TGGCGGCAAT
ATCAATGGAT TTTCTGCAGA AGATTTCACC AATGATTCCG GTGTGGCACT CAAAATCACC
GCCATTCAGC CACCGAATTT GAATCAGTGT TTTCCCTCGG GCTTCACCCA TCTCATGCCG
CCAGGGGCAC CGCCCGCATC GCCCCCGCCT CTTTGCGCCG TGGGCAACAC CATTGCGCCC
AATGGCACAT GCCGGGTGAA TGTGGAAACC ATTTGCCGCG CCGAGGCAGC CCAGGCCACG
GCTGGCGCCA ACCCCACCAC GCTCAGCTTT CCCGGCGCGG GCCTGTCATT TGCCGCAGGC
AGCACCGGCA CGGTGAACGT CAGCAACAGC GGCGGTTCGG CAGCGCTCAA TGTGCAGGCC
ACCATTCCCG CAGGCAGCGG CATCACCATC TCGTCCAACA GCTGCGCGGC AACGCTGCCT
GCGGGCTCCA GCTGCGCCAT CACCCTGACG GCACCTGCGG CGGAAGGCCC GACCACCGTC
AGCATTGCCG GCAGCAACGC CGCAGCCACC ACCACCCCGG TCACCGTGAC AGGTGGCCCG
GCCCCGACCA CCACGCTGAG CATTCCCGCC ACGCCGCTGT CGTTTGCGGC GGGCAGCACG
GGATCGGTGA CCATCACCAA CAGCGGCGGC GCAAATGCGC TCAATGTGCA GGCCAGCATT
CCTGCAGGCA GTGGCATCAC GGTGTCCAAC ACCACCTGCC CTGCCGTCCT GGCACCCTCT
GCCAACTGCA CGATCACGTT GACCGCCCCC TCGGCGGAAG GCCCGACCGC CATCGGCTTC
GGCGGCAGCA ATACGGCGTC CACTCCCGTG CCGGTCACGG TGTCGGCAAC CGGCACGCCC
ACCACGCTGA ACATTCCTGC GACGTCCGTG TCCTTCGGAG CGGGCGGCGC CGGCTCGGTG
ACCATCACCA ACAGCGGCAG CGCACCTGCG CTCAATGTGC AGGCCAGCAT TCCAGGGGGC
AGTGGCATCA CGGTGTCCAA CACCACCTGC TCCGCCATCC TGGCTCCCTC GGCCAGTTGC
ACGATCACGC TGACAGCCCC CTCGGCGGAA GGCCCGACCT CCATCGGCTT CGGCGGCAGC
AACACGGCTT CCACGTCCGT GCCCGTCACG GTGACGACTG CCGTCCTGCC CGCCACGCTG
ACCATTCCCT CGGCGTCCCT GTCCTTCGGA GCGAACGGTG CTGGCTCGGT GACCATCACC
AACAGCGGCA GCGCACCTGC GTTCAATGTG CAGGCCAGCA TTCCGGCGGG CAGCGGCATC
ACGGTGTCCA ACACCACCTG CGCCGCCATC CTGGCTCCCT CGGCCAATTG CACGATCACG
TTGACTGCCC CTTCGGCCGA GGGCCCGACC AACATCGGCT TCGGCGGCAG CAATGCGCCC
GCCGCTACCG CACAGGTCAC GGTCACCGCA CCCGTCGCGC CAACCGCGCC TGCCGTTCCC
CCGGCACCGG TGCTGTTCGG CGCCTACGGC GCAGGCTCGG TGACCATCAC CAACAACGGA
ACGGCGCCTG CGTTCAATCT GCGGGCCATC ATTCCGGTCG GCAGCGGCAT CACGGTGGCC
TCCTCCACCT GCCCGGCGTC ACTGCCGGTG GGCGCAAGCT GCACCATCAC ACTGACGGCG
GCAGGACCGG AAGGCCCCAC GAACATCGGC GTTGGCGGCA GCAACACGCC GGCCACGACG
GTGCCTGTCA CGGTGACGGT CCCTGTCACG CCGACTACGC TGAACATTCC CACTGCCCCC
GTGTCCTTCG GCACCGGCGG CGCTGGTTCG GTGACCATCA ACAACAGCGG AAGCGCACCC
GCGTTCAACG TACAGGCCAC CATTCCGGCC GGCAGCGGCA TCACGGTGTC CAACTCCACC
TGCGCCGCCA TCCTGGCCCC CGCTGCCAGC TGCACGATCA CGCTGACGGC CGCTGCGGCC
GAAGGGCCGA CCGCCATCAG CTTCGGCGGC AGCAACACGC CAGCCACGAC CGTGCCTGTG
ACAGTGACAG CCCCCGTCGC GCCGACTACG CTGGACATTC CCACCGCCCC CGTGTCCTTC
GGCACCGGCG GTGCAGGTTC GGTGACCATC ACCAACAGCG GAAGCGCACC CGCGTTCAAC
GTACAGGCCA CCATTCCGGC CGGCAGCGGC ATCACGGTGT CCACCACCAC CTGCCCCGCC
ATCCTGGCCC CCGCTGCCAG CTGCACGATC ACGCTGACGG CCGCTGCGGC CGAAGGGCCG
ACCGCCATCA GCTTCGGCGG CACCAACACA CCGGCGACGA CGGTGCCGGT CACGGTGACG
GTCCCCGTCA CGCCGACCAC GCTGGACATT CCCGCCGCAC CCGTGTCGTT TGGCACCAGC
GGAGCGGGCA CGGTGACCAT CACCAACAAC GGGCCCGCAC CGGCGTTCAA CGTGCAAGCC
ACCATTCCGG TCGGCAGCGG CATCACGGTG GCGTCCAGCA CCTGTCCCAT CTCCCTGCCC
CCCGGGGCCG ACTGCACGAT CACGCTGACG GCTGCGGCGG CAGAAGGCCC GACCGCGGTC
AGCTTCGGCG GCAGCAATAC GCCCACCACG ACCGTGCAGG TCACGGTGAC GGTGCCCGTT
CCCACGGCCA CGCTTTCGAT ACCCAGCGCT CCGCTGTCGT TCGCTGCGGG CGGTTCGACA
ACGGTCCTCA TCAGCAACAC CGGCGCTTCT GCAGCCTTCA ACGTGACCGC CACGGCGCCG
GCCGGTAGCG GAATCACCGT GCAGTCGAAC ACGTGCGGCG CCGCACTCGC CTCTTTGGCC
AGCTGCGGCA TCACCCTGAC TGCGGCCGCC GCCGAAGGCC CCACGGCCAT CAGCTTCGGC
GGCAGCAATA CGCTGGCCAC GACCGTGCCG GTCACGGTGA CGGCGCCCGT CATGCCGACC
ACGCTGGGCA TGTCCACCAC GCCCGTGTCG TTCAACACAG GCGCAACGGG CTCGGTGACC
ATCACCAACA ACGGTGGGGC CCCTGCGCTC GACGTTCAGG CCACGATTCC GGCAGGCAGC
GGCATCTCGG TGTCGGCCAA CACCTGTGGT TCATCGCTGG CAGCGGGGGC CAATTGCATC
ATCACGCTGA CCGCAAGCGC AGCGGAAGGT CCTACGCCGG TCAGCTTTGC GGGCAGCAAC
ACGTCTGCCA CGACCGTGCC ATTCACGGTG ACGGCGCCCA GCACCACGAC CACGCTGGGA
ATCTCCGCAT CGACCCTGAC GATTGCTCCT GGCGGCACGG GCTTCGTGAC CATCACCAAC
ACGGGGTCGA ATGCCGCCGC CAATATCGGC GCCACCGTCC CCGGCGTCAG TGGGCTGTCC
GTTTCCGGCA ACACCTGCGG GCTGTCGCTG CCGGCCGGAG GGACTTGCAC GGTGACCTTC
ACCGCAGGTT CGGACGAGGG GCCGACCAAT GTCACCATCC AGGGCAGCAA CACCGACACC
GCAGCCGTGT CGATCACGGT CTCGGGTTCC ATCGACATTG GCGCCTACCA CCTCGATGGC
AGCTGTGGTG TGCTTGGCGT CCTTGGCCCC GGCTTCACCC TCACGGCAGG CTCTGCGCCG
CTTCCCGTCG GCACCACGGT GACCATCATC GGTTCGGGAG TTGCCAACAT CGGTGTGTTC
AGTGTGACGG GAGGCACAGC CAGCGTGTCG GTACTTTCCG CAACCTCCCG CCAGATCACC
CTGACCTCGG CACTGCCGGC TGGGGCCACG ATCGCGTTCA GAACCACGCT GTCCATCAGC
GTCGCCTTCA CGCTGAACGC CACGACGACG CTGCCCAACG GCTATGCGGG CACAGGCGAG
AAGCCCGCTG GCAGTGTGAG TTCCACGCTC GTTCTCTGCA GCGCCAGCTG A
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| Protein sequence | MKQISIAPAV VAAIAAHSFP MAANAQSITV APAAAVAATA IPMDNPWSLL ALAIGLAMAA
WLVLRNRQHR ALFMALCTSA IVCATLWHSP DLRAQLTGSF TNPAGETRPL LVAQIVNGGN
INGFSAEDFT NDSGVALKIT AIQPPNLNQC FPSGFTHLMP PGAPPASPPP LCAVGNTIAP
NGTCRVNVET ICRAEAAQAT AGANPTTLSF PGAGLSFAAG STGTVNVSNS GGSAALNVQA
TIPAGSGITI SSNSCAATLP AGSSCAITLT APAAEGPTTV SIAGSNAAAT TTPVTVTGGP
APTTTLSIPA TPLSFAAGST GSVTITNSGG ANALNVQASI PAGSGITVSN TTCPAVLAPS
ANCTITLTAP SAEGPTAIGF GGSNTASTPV PVTVSATGTP TTLNIPATSV SFGAGGAGSV
TITNSGSAPA LNVQASIPGG SGITVSNTTC SAILAPSASC TITLTAPSAE GPTSIGFGGS
NTASTSVPVT VTTAVLPATL TIPSASLSFG ANGAGSVTIT NSGSAPAFNV QASIPAGSGI
TVSNTTCAAI LAPSANCTIT LTAPSAEGPT NIGFGGSNAP AATAQVTVTA PVAPTAPAVP
PAPVLFGAYG AGSVTITNNG TAPAFNLRAI IPVGSGITVA SSTCPASLPV GASCTITLTA
AGPEGPTNIG VGGSNTPATT VPVTVTVPVT PTTLNIPTAP VSFGTGGAGS VTINNSGSAP
AFNVQATIPA GSGITVSNST CAAILAPAAS CTITLTAAAA EGPTAISFGG SNTPATTVPV
TVTAPVAPTT LDIPTAPVSF GTGGAGSVTI TNSGSAPAFN VQATIPAGSG ITVSTTTCPA
ILAPAASCTI TLTAAAAEGP TAISFGGTNT PATTVPVTVT VPVTPTTLDI PAAPVSFGTS
GAGTVTITNN GPAPAFNVQA TIPVGSGITV ASSTCPISLP PGADCTITLT AAAAEGPTAV
SFGGSNTPTT TVQVTVTVPV PTATLSIPSA PLSFAAGGST TVLISNTGAS AAFNVTATAP
AGSGITVQSN TCGAALASLA SCGITLTAAA AEGPTAISFG GSNTLATTVP VTVTAPVMPT
TLGMSTTPVS FNTGATGSVT ITNNGGAPAL DVQATIPAGS GISVSANTCG SSLAAGANCI
ITLTASAAEG PTPVSFAGSN TSATTVPFTV TAPSTTTTLG ISASTLTIAP GGTGFVTITN
TGSNAAANIG ATVPGVSGLS VSGNTCGLSL PAGGTCTVTF TAGSDEGPTN VTIQGSNTDT
AAVSITVSGS IDIGAYHLDG SCGVLGVLGP GFTLTAGSAP LPVGTTVTII GSGVANIGVF
SVTGGTASVS VLSATSRQIT LTSALPAGAT IAFRTTLSIS VAFTLNATTT LPNGYAGTGE
KPAGSVSSTL VLCSAS
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