Gene Daci_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2215 
Symbol 
ID5747778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2427802 
End bp2428689 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content67% 
IMG OID641297299 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001563240 
Protein GI160897658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.136255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATC AGACCCGTGT CCGCAAAGCC GTGTTTCCCG TTGCCGGGCT CGGCACGCGC 
TTTCTGCCCG CCACCAAGGC CTCTCCCAAG GAGATGCTGC CCGTGGTGGA CAAGCCGCTG
ATCCAGTACG CCGTGGAAGA GGCCTACGAG GCCGGCATCC GCGACATGAT CTTCGTCACC
GGCCGCAGCA AGCGCGCCAT CGAGGACCAT TTCGACACCG CCTACGAGCT GGAAAACGAA
CTGGAGAACG CCGGCAAGCA GGCCATGCTG GAGCTGGTGC GCAGCATCAG CCCGGCCGAC
ATGAACTGCC TGTTCGTGCG CCAGCCGCGC TCGCTGGGCC TGGGCCATGC CGTGCTGTGC
GCCGAGCCGC TGGTGGGCAA CGAGCCCTTT GCCGTGCTGC TGGCCGACGA CCTGATGGTG
GGCGAGCCTG GCGGCCCCGG CGTGATGGCG CAGATGACAT CGGCCTTCCA CAAGCAGGGC
CGCTCCCTGC TGGCCGTGCA GGAAGTGCCG CTGGAGCAGA CCAAGCGCTA CGGCATCGTG
GCTGGCGAGC CGGCCGGCGG TTCGCTGATG CGCATCGAGA AGATCGTGGA AAAGCCCGCG
CCCGAGAAGG CCCCCTCGCG CATGGGCGTG GCTGGCCGCT ACGTGCTGAC ACCGGCCATC
TTCGAGGAGA TCCGCAACCA GCCCAAGGGC GTGGGCGGCG AGATCCAGCT GACGGACGCC
ATCGAACGCC TGATGGCCCA TGAAGCCGTC TACGCCTTCC AGTACCAGGG CAAGCGCTAC
GACTGCGGCA GCAAGGAAGG CTTTTTGCAG GCCACGGTGG AACTGGCGCT GCAGCACGAG
GATGTGGGCG CGAGCTTCCG CGAATACCTG CAGGGCCTGA GCATCTGA
 
Protein sequence
MSNQTRVRKA VFPVAGLGTR FLPATKASPK EMLPVVDKPL IQYAVEEAYE AGIRDMIFVT 
GRSKRAIEDH FDTAYELENE LENAGKQAML ELVRSISPAD MNCLFVRQPR SLGLGHAVLC
AEPLVGNEPF AVLLADDLMV GEPGGPGVMA QMTSAFHKQG RSLLAVQEVP LEQTKRYGIV
AGEPAGGSLM RIEKIVEKPA PEKAPSRMGV AGRYVLTPAI FEEIRNQPKG VGGEIQLTDA
IERLMAHEAV YAFQYQGKRY DCGSKEGFLQ ATVELALQHE DVGASFREYL QGLSI