Gene Daci_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2212 
SymbolcysM 
ID5747775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2425859 
End bp2426782 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content66% 
IMG OID641297296 
Productcysteine synthase B 
Protein accessionYP_001563237 
Protein GI160897655 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.199065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGT GTGAGGCTAT GAAAATTTAT CCGACCATCG AAGACGCCAT CGGCCGCACG 
CCCCTGGTGG CATTGCAGCG CATCGGTGCG CAGTCTCGCC AGGAACGTGG CAACGTGGTG
CTGGGCAAGC TGGAAGGCAA CAACCCGGCC GGTTCGGTCA AGGACAGGCC GGCCCTGTCG
ATGATCCGCC GCGCCGAAGA GCGCGGCGAC ATCAAGCCCG GCGACACGCT GATCGAGGCC
ACCTCGGGCA ATACCGGCAT TGCGCTGGCC ATGGCCGCCA CGATCAAGGG CTACCGGATG
GTGCTGATCA TGCCCGAGGA CCTGTCCATC GAGCGTGCCC AGACGATGAA GGCCTATGGC
GCCGAGCTGA TCCTCACGCC CAAGAGCGGC GGCATGGAAT ATGCACGCGA CCTGGCCGAC
CAGATGGTGG CCCAGGGCAA GGGCGTGGTG CTCGACCAGT TCGGCAACCC CGACAACCCG
CGCATCCACT ACGAGACCAC CGGTCCCGAG CTGTGGGAGC AGACCGGCGG CGAGATCACG
CATTTCGTGA GCGCCATGGG CACCACGGGC ACGATCACCG GCGTGGCGAA GTTTCTCAAG
GAAAAGAACC CGGCCATCCG CATCGTGGGC GCCCAGCCGG CCGAGGGCTC GCGCATCCCC
GGCATCCGCA AGTGGCCCGA GGAGTACATG CCCAAGATCT ACGACGCCTC GCTGATCGAC
GAGACCGTGC TCGTGGGCCA GGACGATGCC GAGGACATGG CGCGCCGCCT GGCGCGCGAG
GAAGGCATCT TTGCCGGCAT CTCGGCGGCG GGCGCCTGCT GGGTGGCCCA GCAGATTGCC
GAGCGCGAGA ACAACGCCAC CATCGTCTTC GTGGTCTGCG ACCGCGGCGA CCGCTATCTG
TCCACGGGCG TCTTCCCCGC CTGA
 
Protein sequence
MAQCEAMKIY PTIEDAIGRT PLVALQRIGA QSRQERGNVV LGKLEGNNPA GSVKDRPALS 
MIRRAEERGD IKPGDTLIEA TSGNTGIALA MAATIKGYRM VLIMPEDLSI ERAQTMKAYG
AELILTPKSG GMEYARDLAD QMVAQGKGVV LDQFGNPDNP RIHYETTGPE LWEQTGGEIT
HFVSAMGTTG TITGVAKFLK EKNPAIRIVG AQPAEGSRIP GIRKWPEEYM PKIYDASLID
ETVLVGQDDA EDMARRLARE EGIFAGISAA GACWVAQQIA ERENNATIVF VVCDRGDRYL
STGVFPA