Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2210 |
Symbol | |
ID | 5747772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2424253 |
End bp | 2424630 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641297293 |
Product | LrgA family protein |
Protein accession | YP_001563235 |
Protein GI | 160897653 |
COG category | [R] General function prediction only |
COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.522821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.122076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGTATG CCATCACCGC CTTGTTCGCC TTCCAGTTGC TGGGGGAGGC CATCGTCCAG CTCACGGGGC TGCCGCTTCC GGGCGCGCTC GTGGGCACGC TGCTGCTGCT GGCGGCGCTG TTGCTGCACG GCCGCCTGCC CGAGTCGCTG GAGAAGGCCG CCGGCGTGCT GCTGCAAAAC ATGATGCTGC TGTTCATTCC CGTCATTGCA GGCGTGATGC TGGAGTTCGA CCGGCTGTCG CGCGAATGGC AGCCCTTCGT GATCGCCTGC GTGGCGGGTG CGGCCATTAC CTTCCTGGCC ACGGCCTTCA CCTTCCGCTG GTGCCTGGAG CGCCAGCGCG CCCGCGAAGC GGCCGCCAGC CGGGGAGACA AGGCATGA
|
Protein sequence | MLYAITALFA FQLLGEAIVQ LTGLPLPGAL VGTLLLLAAL LLHGRLPESL EKAAGVLLQN MMLLFIPVIA GVMLEFDRLS REWQPFVIAC VAGAAITFLA TAFTFRWCLE RQRAREAAAS RGDKA
|
| |