Gene Daci_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2210 
Symbol 
ID5747772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2424253 
End bp2424630 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content68% 
IMG OID641297293 
ProductLrgA family protein 
Protein accessionYP_001563235 
Protein GI160897653 
COG category[R] General function prediction only 
COG ID[COG1380] Putative effector of murein hydrolase LrgA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.522821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.122076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTATG CCATCACCGC CTTGTTCGCC TTCCAGTTGC TGGGGGAGGC CATCGTCCAG 
CTCACGGGGC TGCCGCTTCC GGGCGCGCTC GTGGGCACGC TGCTGCTGCT GGCGGCGCTG
TTGCTGCACG GCCGCCTGCC CGAGTCGCTG GAGAAGGCCG CCGGCGTGCT GCTGCAAAAC
ATGATGCTGC TGTTCATTCC CGTCATTGCA GGCGTGATGC TGGAGTTCGA CCGGCTGTCG
CGCGAATGGC AGCCCTTCGT GATCGCCTGC GTGGCGGGTG CGGCCATTAC CTTCCTGGCC
ACGGCCTTCA CCTTCCGCTG GTGCCTGGAG CGCCAGCGCG CCCGCGAAGC GGCCGCCAGC
CGGGGAGACA AGGCATGA
 
Protein sequence
MLYAITALFA FQLLGEAIVQ LTGLPLPGAL VGTLLLLAAL LLHGRLPESL EKAAGVLLQN 
MMLLFIPVIA GVMLEFDRLS REWQPFVIAC VAGAAITFLA TAFTFRWCLE RQRAREAAAS
RGDKA