Gene Daci_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2205 
Symbol 
ID5747767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2418467 
End bp2419441 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID641297288 
Producthypothetical protein 
Protein accessionYP_001563230 
Protein GI160897648 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0725118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCACA CCTCCCGCAT CGCGCTCGCC GGCATCCTCG GCGCCCTCGC GCTTTCGGGC 
GCAGCCCATG CCCAGGGCTA CCCCACCAAG CCCATCAAGC TGCTCGTGCC CTTCGCGGCC
GGCGGCACCA CCGACCTGAT CGCGCGCATC GTGGCCGAGC CGCTGGGCCG CGCCCTGGGC
CAGCCCGTGG TGGTCGAGAA CAAGGGCGGC GGCGGCGGCA GCATCGGCGC GGCCGAGACG
GCGCGCTCCC AGCCCGATGG CTACAGCCTG GGCATCGCCA CCGTGTCCAC CACGGCCACC
AACCCGGCGA TCAACCCCAA GATCCCGTAC AACGTGCTGA CCGACTTCAC GCCCATCGTG
AACATCGCAG CCACGCCCAA CATCATTGCG GCCAACCCCA AGTTCGCGGG CAAGAACTAC
CAGGAGTTCC TGGCCGAGGT GAAGAAGAAC CCCGGCAAGT ACTCCTACGC CTCGCCCGGC
AACGGCAGCA TCACCCATCT GATGATGGAG ATGTTCAAGC TGTCCACTGG CACCGACATC
ACCCACGTGC CCTACCGTGG CAGCGGCCCC GCGCTGAACG ACGCCGTGGC CGGCCAGGTT
CCGCTGATCT TCGACAACCT GCCCTCAGCC CTGGGCTTCG TCAAGGAAAA GCGCCTGGTG
CCCATCGTGG TGGCCGCGCC CCAGCGCCTG GCAGCGCTGC CCGATGTGCC CACCTTCAAG
GAAGTGGGCC TGGCCCCCGT CAACCGCATG GCCTACTACG GCATCGTCGG CCCCAAGAAC
CTGCCGCGCG ACATCGTGGA CAAGGTCAAC GCCGCCACGC GCAAGGTGCT GCAGGACCCG
GCCATCAAGA AGCGCATCGA GGAAACCGGC TCGCTGATCG TGGCCGACAC GCCCGAGCAT
TTCTTTGAAG AGATCAAGGC CGAACTGGCG GTCTACAAGG ACGTGGTGCA AAAGCAGAAC
CTGACGATGG ATTGA
 
Protein sequence
MTHTSRIALA GILGALALSG AAHAQGYPTK PIKLLVPFAA GGTTDLIARI VAEPLGRALG 
QPVVVENKGG GGGSIGAAET ARSQPDGYSL GIATVSTTAT NPAINPKIPY NVLTDFTPIV
NIAATPNIIA ANPKFAGKNY QEFLAEVKKN PGKYSYASPG NGSITHLMME MFKLSTGTDI
THVPYRGSGP ALNDAVAGQV PLIFDNLPSA LGFVKEKRLV PIVVAAPQRL AALPDVPTFK
EVGLAPVNRM AYYGIVGPKN LPRDIVDKVN AATRKVLQDP AIKKRIEETG SLIVADTPEH
FFEEIKAELA VYKDVVQKQN LTMD