Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2204 |
Symbol | |
ID | 5747766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2417500 |
End bp | 2418420 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641297287 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001563229 |
Protein GI | 160897647 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.150057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGCA GTGACAAAGC CACTGAAATC CGCCCACGCC CCATGCAACC CTCTTCCATA GACCCCACCC TGCTGCGCAG CTTCTGCGCC GTGGCCGAAA CCGGCAGCTT CACGCGCGCG GCGCAGGGCG TGCACCTGAC CCAGTCCACG GTCAGCCAGC AGATCCGCAG GCTGGAGGAG CAAATGGGCT GCACGCTGCT GGACCGCAGC GGGCGCCATG TGGAATGCAC GCTGGAAGGA GAGCGCCTCC TGGCCTATGC GCAACGCATC CTGGCCCTCA TGGACGAGGC CGTGGAGCAG TTGGCCGGCG CCACCGAAGC CGTGCTGCGC ATCGGCGTAC CAGAGGACTT TGCCGGCCAT GCCTTGATGC CCGCCTTGGG CGCGCTGGCG CGCAGCCAGC CGCAGTTGCG CCTGGAGCTG ACCAGCGGGT TGTCGCAGGC GATATGGCAG CAACTGCAGG CCGGCGAGCT GGACCTGGCC ATCGTCAAGC AGCGCAGCGG TAGCACGCCC GGCATGGCGC GCTGGCCCGA ACCGCTGGCC TGGATAGACA GTGCGCGGCA TCCCTGCCAC GGGATGGATC CCTTGCCCCT GGTGGTATTT CCGCAGGGCG GCCTGTACCG CAGCGAGATG ACGCATGCGC TGGATGCCGC CGGCCGGCGC TGGCGCCTGG CCTATGTGAG CGCCAGCCTG GCCAGCCTGG AAGCCGCCGT GGAGCAGGGC CTGGGCATCA GCCTGCTGCC GCGCCGGCTG GTCGGGCCCG GCCACCGCCT GCTCGACGGC ATGGCCGGCT TCGCCCCCGT GCCTGATGTG GAGGTGGCAC TGCATGTGCG CGCCCCGTTG TCGGCGCCGG GGCGGCGCCT GGCCGAGCGC CTGAGCGAGG TGTGCGAGGC GTTGCTGTCG CCTGCCGCTG GCGAAGCCTG A
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Protein sequence | MPGSDKATEI RPRPMQPSSI DPTLLRSFCA VAETGSFTRA AQGVHLTQST VSQQIRRLEE QMGCTLLDRS GRHVECTLEG ERLLAYAQRI LALMDEAVEQ LAGATEAVLR IGVPEDFAGH ALMPALGALA RSQPQLRLEL TSGLSQAIWQ QLQAGELDLA IVKQRSGSTP GMARWPEPLA WIDSARHPCH GMDPLPLVVF PQGGLYRSEM THALDAAGRR WRLAYVSASL ASLEAAVEQG LGISLLPRRL VGPGHRLLDG MAGFAPVPDV EVALHVRAPL SAPGRRLAER LSEVCEALLS PAAGEA
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