Gene Daci_2202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2202 
Symbol 
ID5747764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2415723 
End bp2416985 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content72% 
IMG OID641297285 
Productmajor facilitator transporter 
Protein accessionYP_001563227 
Protein GI160897645 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.61634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.3228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC CCCCTGGGCC TGAAGCCATG TCGTCCATTG CGCCTGCACG CACCGAGGCG 
CCTGCCGCAG CGCACGCCAT TCCAACGGCG CTGTGGCTGG CCACCGTGGT CCTGGTCACG
CTGAACCTGC GCCCGTTTCT CACGGCCATC GGCCCGCTGG GCCCGCAGAT ACAGTCCGCC
ACCGGCATGG ATCTGTCCAC GCTGTCCTGG CTGACGCTGC TGCCCATGGC GTTGATGGGC
GTAGGCGCCT GGCTGGCCCC GGCCGCGCTG CGGCGCCTGG GTCCGCGCCG CGCCGTGATC
GGGTCCTTGG CGGTGATTGC GCTGGGCTGC GCGCTGCGCG TGGCGGGCTC CAGTGCGGCC
ACCCTGCTGG CCACGGCCGC GCTGTGCGGC GCTGGCGTGG CCCTGGTGCA AGGCGTGCTG
CCGGGCCTGA TCAAGCGCCA GTCGCCCGCA CGCATGGCCC AGATGATGGG GTTGTACTCG
GCCGCGCTCA TGGGCGGCGG GGCGCTCGGT GCCCAGATTT CGCCGCTGGC CGTGCAATGG
GGGCTGGACT GGCGCTTTGC GCTGGCGCTC TGGACTGCGC CCGCCCTGCT GGCCTTGGTG
TTGGCGCGGC ATGCGCTGAG CACATTGCCC GGTCCGGCGC CCATGGCGAC CCAGGCCTCG
CAAGACACCG GCTGGCTGCG CCAGCGCCCG CGCACCTGGC TGCTGATGGC CTGCTTCGGC
CTCATCAACG GCGGCTATGC GGCCATGGTG GCCTGGCTTG CGCCTTTCTA CCAGACGCAC
GGCTGGAGCC CCGCGCAAAG CGGCGGCCTG GTGGCCCTGC TGTCGGTGGC CCAGGCCAGC
GCCGCGCTGG GACTGCCCGT GCTGGCTTCG CGCCATGCCG ACCGGCGGCC ATGGCTGGGG
TTCACGCTGC TGTGCCAGAT CATCGGCCTG GCCGCGCTGG CCTGGTGGCC CGATGCGGCG
CCGCTGCTCA ACATCGTCAT CCTCGGCATC GGCCTGGGTG GCTGCTTCGC GCTGATGATG
GTGGTGGCGC TGGACCATCT TCCCCACCCC ACGCAGGCCG GTGCGCTCAA TGCCTTGATG
CAGGGCGGCG GCTTTCTGAT TGCGGCGCTG GCGCCCTATG TGATTGCCCG GCTGCATCAG
TTCACGGGCG GATTCGGCGC CGGCTGGCTG GCCCAGATGG CCGCCGTGCT CGTGGTCTGC
GTGCTGGTGT CACGCCTGGC GCCGCAACGC TACGCCCAGG CCATGCGGTC ACCCGGCGAC
TGA
 
Protein sequence
MATPPGPEAM SSIAPARTEA PAAAHAIPTA LWLATVVLVT LNLRPFLTAI GPLGPQIQSA 
TGMDLSTLSW LTLLPMALMG VGAWLAPAAL RRLGPRRAVI GSLAVIALGC ALRVAGSSAA
TLLATAALCG AGVALVQGVL PGLIKRQSPA RMAQMMGLYS AALMGGGALG AQISPLAVQW
GLDWRFALAL WTAPALLALV LARHALSTLP GPAPMATQAS QDTGWLRQRP RTWLLMACFG
LINGGYAAMV AWLAPFYQTH GWSPAQSGGL VALLSVAQAS AALGLPVLAS RHADRRPWLG
FTLLCQIIGL AALAWWPDAA PLLNIVILGI GLGGCFALMM VVALDHLPHP TQAGALNALM
QGGGFLIAAL APYVIARLHQ FTGGFGAGWL AQMAAVLVVC VLVSRLAPQR YAQAMRSPGD