Gene Daci_2190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2190 
Symbol 
ID5747752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2403465 
End bp2405090 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content69% 
IMG OID641297273 
Productglycosyl transferase family protein 
Protein accessionYP_001563215 
Protein GI160897633 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.314824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTCT TCTCACCAGC CGGCATGGCC GAGGCGCTGC CCGTGCCGGA TCTGTCGCAC 
CGGACCAGGG ATGCCAGCGG GCTGGCCGGC GACCTCGCCT GCATGGCCCT GCTGGTGCTG
GCATGGCTGG CCGCCACGGC ATGGGCGCGT CCGCTGATGC TGCCCGATGA GGGGCGCTAT
GTGGCAGCCG CCTGGGAAAT GCTCCATTCG GGACAGTGGC TCACGCCCAC GCTGGACGGC
CTGCCCTTTT TCCACAAGCC ACCGCTTTTC TACTGGATCA CGGCCGCCTC GCTGAAGCTG
TTCGGCATGG GTGAACTGGC CGCGCGTGCG GCGCCCATCC TGGGTGCGAC GCTGGGCGCG
CTGGCCCTGT ATGCGTTCAC GCAGCGTTGG CTGGGCCGGG CATTGGCGCG CCGGGTGCTG
CTGGTGCTGG CGGTGCAGCC CCTGTTTTTC GTCGGCGGCC AGTTCGCCAA TCTCGACATG
CTGGTGGCCG GGATCATCGT CGCGACGGTC CTGGCCCTGG CCCATGTGGC GCTGTGCCTG
GAGCGTGGCC TGCCTGCCCG GCATGTGCTG GTCCTGGCGT ATGCACTGGC GGCCCTGGGC
GTGCTGGCCA AGGGCCTCAT AGGCTTTGTG CTGCCCGCGC TGGTCATCGG CAGCTGGATG
CTGATGCGCG GGCGGTGGCG GCTGCTGCCT TCGCTGCTGT CGCTGCCGGG TTTTGCGTTG
TTCGCTGCCA TTGCCGTGCC CTGGTTTCTT GCCATGCAGC AGCGCTTCGA TGGCTTTTTC
CACTATTTCT TCGTGGTGCA GCATCTGCAG CGCTTTGCAT CCTCTGGCTT CAACAACGTG
CAGCCCTGGT GGTTCTACGT TGCCGTGCTG GTGGTGATGG GCCTGCCCGG CCTGCTGTGG
TCGCGCGCCC TGCTGCAGCG GGACTACTGG CGCGCCGGTG GCGACGGGCT CCTCGCATCG
GTGCGCCTGC TGATGGCCGT GGCCGCCGGC TGCGTGCTGG TGTTCTTCTC GCTGCCCCAG
TCCAAGCTCA TTGGCTACAT CCTGCCGGCC GTGCCGCCGC TGGCATGGCT GATGGCGGAT
GCCAGCCTGG CGGCCACAGG CTCCTCCGGC CCGGCGGGGC GCCGGCGTGC CTGGCTGGGC
AGCATGGCCC TGAGCGCGGC CCTGGGGCTG GCGGCCGTGG CGGGCCTGGC CGTCAGCCAT
GTGCATTCAT CGCGCGAACT GGGCCTTGCC CTGAAGTCCC AGCGCCATAT GGGCGAGCCT
GTCTACATGC TGGACGGCTA CTGGTATGAC GTGCCGTTCT ATGCGCGGCT GCGCGAGCCC
GTCCCCGTGG TGGGGCGCTG GGATGAGGCG TCCATCGACC TGCATGACAA CTGGCGCAAG
GAGATGAAGG ATGCCGCAGG CTTTGCGCCG CAACTGGGGC GCTGGCTGCT GCCGCAGCCT
GAGCAGTTGC CGGCCCGGCT GTGCGCGGCC GGGGTCAGCT GGGTCGTGGG AGACCAGAAC
GCGCGCCGCA ACTATCCGTT TCTGGTGCAG CAGCCCCTGG CGAGGGACCA GGCTGCAGCG
TTGTGGCGCG TGGACAGCCG GGAGCCCGGC ATGGCCGCAG CGCTGGGCTG CGGCACCCGT
CCCTGA
 
Protein sequence
MRFFSPAGMA EALPVPDLSH RTRDASGLAG DLACMALLVL AWLAATAWAR PLMLPDEGRY 
VAAAWEMLHS GQWLTPTLDG LPFFHKPPLF YWITAASLKL FGMGELAARA APILGATLGA
LALYAFTQRW LGRALARRVL LVLAVQPLFF VGGQFANLDM LVAGIIVATV LALAHVALCL
ERGLPARHVL VLAYALAALG VLAKGLIGFV LPALVIGSWM LMRGRWRLLP SLLSLPGFAL
FAAIAVPWFL AMQQRFDGFF HYFFVVQHLQ RFASSGFNNV QPWWFYVAVL VVMGLPGLLW
SRALLQRDYW RAGGDGLLAS VRLLMAVAAG CVLVFFSLPQ SKLIGYILPA VPPLAWLMAD
ASLAATGSSG PAGRRRAWLG SMALSAALGL AAVAGLAVSH VHSSRELGLA LKSQRHMGEP
VYMLDGYWYD VPFYARLREP VPVVGRWDEA SIDLHDNWRK EMKDAAGFAP QLGRWLLPQP
EQLPARLCAA GVSWVVGDQN ARRNYPFLVQ QPLARDQAAA LWRVDSREPG MAAALGCGTR
P