| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2189 |
|---|
| Symbol | |
|---|
| ID | 5747751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2402744 |
|---|
| End bp | 2403283 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641297272 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_001563214 |
|---|
| Protein GI | 160897632 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.327196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGT GGGCGGGGAT GACTGAGCCG GGGCACTGGG TCGCCATTGG CCTGGGCGCC
AATCTGGGCG ACCGGGGCCA GGCGCTGGCC CAGGCGCTGC AGGCCATTGG CGGCCTGCCG
GGCACGCGCC TTGTGGCCGT GTCCTCGCTC TACAGCACGG CACCCGTCGA TTCCAGCGGT
CCGGACTATC TGAACGCCGT GGCCGCCGTG CACACCACGC TGCAGCCGCT GGCCCTGCTC
GATGCGCTGC AGGCCATCGA ACTGGCGGCC GGCCGTGAGC GTCCCTACCG CAACGCGCCG
CGCACGCTGG ACCTGGACAT CGAACTGTGG GACGACGAGC GCATCGCGCT GCCGCGCCTG
AGCGTGCCGC ACCCGCGCAT GCACGAGCGC GCCTTCGTGC TCGTGCCGCT GGCCGAGATC
GCGCCTGAGC GCATCACACC CGCGCAGCTG CAGGCCGTGG CGGGGCAGGG CATCGTGCGC
AGCGCCGGGC CCGGCTGGCA TCTTCGGGAT GGCGGGGCCC TGGCGAACGG CTCCCGTTAA
|
|---|
| Protein sequence | MAPWAGMTEP GHWVAIGLGA NLGDRGQALA QALQAIGGLP GTRLVAVSSL YSTAPVDSSG
PDYLNAVAAV HTTLQPLALL DALQAIELAA GRERPYRNAP RTLDLDIELW DDERIALPRL
SVPHPRMHER AFVLVPLAEI APERITPAQL QAVAGQGIVR SAGPGWHLRD GGALANGSR
|
|---|
| |