Gene Daci_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2184 
Symbol 
ID5747746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2397243 
End bp2398301 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content68% 
IMG OID641297267 
Producthypothetical protein 
Protein accessionYP_001563209 
Protein GI160897627 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.398827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC ACCTGCCCTC GCCCATCATC TCCCCGCAGC CCGCGCCCAC GCGCGGCGTG 
ACGCTTTCCA GCTATGTGCT GATGGCAGGC GCCCTGCTGC TGATCATGTG GCAGGGGCTG
TTGCCGGGCA TGCTCTGTGT CTGCGTGGGC TTTCTGGTCA CGCGCGCCCT TGCCGGGCTG
CTGGCACGTG CCCAGCCCAA GGCCCGGCGC GGCTCGCTGC CGCGCTGGAC CCAATTGGTG
GCAGCCACCA TCGTCATTCT TGCGCCGCTG GCCCTGCTGA GCGGCGCGCT CTCGCATACA
CGCACCTACA TCACCGACGC GCCGCAGCAG TACCGCGAAC TGCTCGACTA TCTGGCCCAC
ACGGTGCTGG AGCTGCGTGA CAAGCTGCCC GCCGACATGG CCGACCAGTT GCCGGACGGC
GCGCAGGAAA TCCAGCACCT GCTGGCCAGC TACCTGGCGG CCAAGGCCGG CGCCCTGGCC
CATGCGGGCC GCGCCTGGCT TACCGGCCTG CTGTACGCCT ATGTGGGCCT GATCATCGGC
GCGCTGGCCG CCGTGCGCCC CATCACCACG CGCCGCCCGC CCCTGGTGGC TGCGCTGCGC
GAACGCATCC GGCTCATGGG GCTGGCCTTC CGCCAGATCG TGGCGGCGCA GTTCTGGATT
GCGGCCTTCA ACACTTTCCT GACGGCCATC TTCCTGCTGG GCGTGCTGCC GCACTGGAAC
CTGACCCTGC CCTACACGCC AGCCCTGATC ACGCTGACCT TCATCGCGGG CCTGGTGCCC
ATCGTGGGCA ACCTGCTGTG CAATGCGGTG ATCACCATCG TGGGGCTGTC GGTCTCCCCG
GTGGCCGCCG CGGCCTGCCT GGGCTTTCTG ATCCTGATCC ACAAGGCCGA GTACGTGATC
AACGCCAAGG TGGTGGGCCA GCGCACGCAC ATGGGCGTGT GGGAGCTGCT GGCCGTGATG
TTCGTGGCCG AGTCGGTGTT CGGCCCCGCA GGCCTGGTGG CGGCGCCGCT GTTCTACGCC
TATCTCAAGA AAGAGCTGGA AGCCGTCCGG CTGGTCTGA
 
Protein sequence
MTQHLPSPII SPQPAPTRGV TLSSYVLMAG ALLLIMWQGL LPGMLCVCVG FLVTRALAGL 
LARAQPKARR GSLPRWTQLV AATIVILAPL ALLSGALSHT RTYITDAPQQ YRELLDYLAH
TVLELRDKLP ADMADQLPDG AQEIQHLLAS YLAAKAGALA HAGRAWLTGL LYAYVGLIIG
ALAAVRPITT RRPPLVAALR ERIRLMGLAF RQIVAAQFWI AAFNTFLTAI FLLGVLPHWN
LTLPYTPALI TLTFIAGLVP IVGNLLCNAV ITIVGLSVSP VAAAACLGFL ILIHKAEYVI
NAKVVGQRTH MGVWELLAVM FVAESVFGPA GLVAAPLFYA YLKKELEAVR LV