Gene Daci_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2183 
Symbol 
ID5747745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2396367 
End bp2397212 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID641297266 
Producthypothetical protein 
Protein accessionYP_001563208 
Protein GI160897626 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.502228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGA GTTACGAAGA CACGCCAACG GCCCTGCAAT ACTTTGCAGC GCTGGTGCAA 
AGCGATGACC ACCTGCCGTT GATGGAGGCG GCAATCAGCA TCGCTCAGGA TGCCGTGCCC
GATCTCGACC TGCAGGCGGC CAGCGCCGAG CTGGACCGGC TGCAGGTGCG CCTGCTCCAG
CGCCTGGCCG GCGAAACCGA TTCGCTGCAG CGCCTGCGCG TGCTCAACCA GTTCTTCTAT
GGCGAGCTGG GCTTTGGCGG CAATCTCAAC GATTACTACG ACCCGGCCAA CAGCTACATC
CACCATGTGC TGCAGACGCG GCGCGGCATT CCCATCAGTG TGGCGCTGAT CTGGCTGGAG
CTGGCTGCGG CCATCGATCT GCCGGCACAG GGCGTGAGCT TTCCCGGGCA TTTCCTGGTC
AAACTGCGCC TGCCCCAGGG GCAGGTGGTG ATGGACCCGC TGAGCGGTGA ATCCTTCTCG
GCCAACAGCC TGGCCGAGCG GCTGGAGCCC TTCTGGCAGA ACGCCGGCCT GTCCGCCGAG
GAGGCGGCTC CGCTGGGCAT GTACCTGCAG GGCGCATCGC CGCGCGACAT CCTGGAGCGC
ATGCTGCGCA ATCTGCAGGA GATCCACCAT GCGCGGCGCG ACTGGCCGCT GCTGGTGGCC
GTGCTCAACC GGCTGGCCGT GCTGCGGCCC GACATGCCGG AGATCTTCCG GGACCGGGGG
CTGGCCTATG CGCAATGGGG AGTGACCGAG CGTGCGCTCG AAGACCTGGA GCGCTTCCTG
CATTCCCAGC AGGGCGCGCA GGCCGTGGCC GTGCGCGAGG TGATCCGGCG GCTCAGGGGG
CTGTAG
 
Protein sequence
MSWSYEDTPT ALQYFAALVQ SDDHLPLMEA AISIAQDAVP DLDLQAASAE LDRLQVRLLQ 
RLAGETDSLQ RLRVLNQFFY GELGFGGNLN DYYDPANSYI HHVLQTRRGI PISVALIWLE
LAAAIDLPAQ GVSFPGHFLV KLRLPQGQVV MDPLSGESFS ANSLAERLEP FWQNAGLSAE
EAAPLGMYLQ GASPRDILER MLRNLQEIHH ARRDWPLLVA VLNRLAVLRP DMPEIFRDRG
LAYAQWGVTE RALEDLERFL HSQQGAQAVA VREVIRRLRG L