| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2166 |
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| Symbol | |
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| ID | 5747728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2380314 |
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| End bp | 2381702 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641297249 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001563191 |
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| Protein GI | 160897609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.187874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCT TCCAAGACAT TCAGCAACGA GAAACCGGCC TGCGCCAGCA GCTGTCCGCC
GCCCAGATGG TGATGATCGC CATTGGCGGC GCCATCGGCA CCGGCCTGTT CATGGGCAGC
GCCTTCGCCA TCGGCTTCGC CGGGCCCAGC GTGCTGGTCA GCTATGCCAT CGGCGCGCTG
ATCTCGCTGC TGCTCATGGG CTGCCTGGCC GAGATGACGG TGGCGCACCC GACCTCGGGC
TCGTTCGGCG CCTATGCCGA GCACTACATC AGCCCGCTGG CCGGCTTCAT GGTCCGCTAT
GCCTACTGGG CCGCCGTGGT GCTGGCCGTG GGCATGGAGG TGACGGCCAT CGGCATCTAC
ATGGGCTACT GGTTCCCGGA CGTGCCGCGC TGGATCTGGG TGGTGGTGTT CTCGGGCGCG
CTGGTGGCCG TCAACGCCAG CAGCGTCAAG GCCTTCGGCC AGGTGGAGTA CGGCTTTTCC
ATGGTGAAGA TCATCGCCAT CGTGGCCTTC ATCCTGATCG GCGCCTGGGT GGTGTTCGGC
TCGCAGCCCC AGGGCATCGG CTTTTTCAAC TACACGGCCG ATGGCGGCTT CTTCCCCAAG
GGCCTGTGGG GCACCTGGGT GGCCGTGATC ATCGCCATCT TCAGCTACCT GAGCCTGGAG
GCCGTGGCCG TGGCGGCCGG CGAGGCCGAG GACCCCAAGC GCGCCATCAC CCGGGCCTTT
CGCACCACCA TGGCGCGCCT GGTGATCTTC TACCTGGCCA CGATCGCGCT GATGCTGGCC
ATCGTGCCCT GGCAGCAGGC CGGCACGGAC AAGAGCCCCT TCGTGAAGGT GATGGAGATC
ATCGGCATCC CGGGCGCTGC CAGCATCATC AACTTCGTGG TGCTGGTGGC CGCGCTGTCG
GCCATGAACA GCCAGCTGTA TGTGACCTCG CGCATGATGT TCAGCCTGTC GCGCGGCGGC
TATGCGCCCT CGGTGTTCGG GCGGCTGAAC AGCCGGGGCG TGCCCGTGGC GGCCATTGCC
ATCTCCTGCC TGGGCATTGC CGTGGCCGTG GCCGTGAACC TGTGGAAGCC CGAGGGCTCG
CTGCTGTGGA TGATGTCCGT GTCCATGTTC GGCGCCATGT TCACGTGGTT CATGATCTTC
GTGACCCATC TGTTCTTCCG CGCACGCTGG TCGCGCGAGC ATCCGGGCCA GCGCCTGCAG
TTCCGCATGT GGGGCTTTCC GCTGTTCACG CTGGCCGGCG CCGCGCTGAT GCTGGGCGTG
ATCGTCACCA CCTATTTCAC CGAGGTCTTC CACATGACGC TGCTCACGGG CCTGCCCTTC
CTGGGCCTGC TGGCCCTGGT GTACGCGCTG TGGTACCGGC CCCGCGCGCA AGCGCGCAAG
AAGGACTGA
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| Protein sequence | MAAFQDIQQR ETGLRQQLSA AQMVMIAIGG AIGTGLFMGS AFAIGFAGPS VLVSYAIGAL
ISLLLMGCLA EMTVAHPTSG SFGAYAEHYI SPLAGFMVRY AYWAAVVLAV GMEVTAIGIY
MGYWFPDVPR WIWVVVFSGA LVAVNASSVK AFGQVEYGFS MVKIIAIVAF ILIGAWVVFG
SQPQGIGFFN YTADGGFFPK GLWGTWVAVI IAIFSYLSLE AVAVAAGEAE DPKRAITRAF
RTTMARLVIF YLATIALMLA IVPWQQAGTD KSPFVKVMEI IGIPGAASII NFVVLVAALS
AMNSQLYVTS RMMFSLSRGG YAPSVFGRLN SRGVPVAAIA ISCLGIAVAV AVNLWKPEGS
LLWMMSVSMF GAMFTWFMIF VTHLFFRARW SREHPGQRLQ FRMWGFPLFT LAGAALMLGV
IVTTYFTEVF HMTLLTGLPF LGLLALVYAL WYRPRAQARK KD
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