Gene Daci_2157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2157 
Symbol 
ID5747719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2370645 
End bp2371958 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content61% 
IMG OID641297240 
Producthypothetical protein 
Protein accessionYP_001563182 
Protein GI160897600 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.285648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.808245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTC TGCTGATCGC GTTGCTTACG CTGCTCAATG GGGTGTTTGC AATGTCCGAA 
TTGGCACTGG CCTCCAGCCG CAAGGCTCGG TTGGTGGCAC TGGCTGAAAC AGGCGACAAG
GGTGCGGTGG CAGCACTGGC CTTGCTCGAA AACCCCACGC AATTTCTTTC TTCGGTGCAG
GTGGGCATCA CCTCCATCGG CCTGCTCAAC GGCATTTTGG GCGAGGCGGC CTTCAGTGAC
GGGCTGGCCG CATGGCTGCT GGGCCTGGGA ATTCCGGAAC GCGCGGCCAG CATTTCTGCC
ACGGCGCTCG TCGTGACCGT GATCACCTTC GTCACCATCG TCTTCGGCGA GCTGGTGCCA
AAGCGCATTG GCCAGCTTTA TCCCGAAACC GTGGCCACGG TGGTTTCCCG GCCCATGACC
TGGGTGGCGT CGGCTGCAAA GCCCTTTGTG CGGCTGCTGG CCTTTTCCAC GCGCGCCATG
CTGACTCTGC TGCGCATCAA TGAATCCGCA GCGCGCGCCG TGACCGAAGA GGAAATCGTG
GCAAGCCTGG CCGAAGGGCG GGATGCCGGA GTGATCGAGG CCAACGAGCA CCAGATGGTG
CAAAACGTCT TTCACCTCGA TGACCGCTCA CTGACGTCGA TCATGGTCCC GCGCGGCGAC
GTGCAATGGC TGGACGCCGA CATGACCGTC ACCGAGGCAT TGCAGGCCTC GGCCGACGAC
CACTCGAAGG GTGGGCATTC CTGGTACCCG GTGTGCCGCA ATTCGCTGGA TGACGTGGTC
GGCATCATCA GCGTGGCGCG CCTGCTGGCA TTGGGCTCGG ATGCCGCCGG CACCACGCTG
TACGAACATG TGCTGCCGGC TTCTTTCCTG CCCGAGACGC TCAGCGCCAT GGAGCTGCTG
GAGCAATTGC GTGCCCGGTC CGGGCGCATG GTGTTTGTGG TGGATGAATA TGGCGTGGTG
CAGGGCATCA TGACGCCCCG GGATTTGCTC GAGGCGATTA CCGGCGAGTT ACAGCCTGTG
ACCGAGGCAG AAGCCTGGGC CATGCAGCGC GAGGATGGCT CCTGGCTATT GGACGGTCTG
ATGCCCATAT CGGAGCTGAA GGCGCGCCTC GATATTCGTG ATCTTCCCGA TGAGCACCGC
GGCAGATACA ACACCGTGGC GGGGCTTCTC ATGGCAGAAA GCGGTCATTT GCCCATTCTG
GGGGAACGGG TCAGCTGTGC GGGCTGGATC TTCGAGGTCA TCGATCTCGA TGGCAAACGC
ATTGACAAGG TGCTGGCCAT ATCGGATTTA TCCGAGAACT ACTCTTCGCA ATAG
 
Protein sequence
MDFLLIALLT LLNGVFAMSE LALASSRKAR LVALAETGDK GAVAALALLE NPTQFLSSVQ 
VGITSIGLLN GILGEAAFSD GLAAWLLGLG IPERAASISA TALVVTVITF VTIVFGELVP
KRIGQLYPET VATVVSRPMT WVASAAKPFV RLLAFSTRAM LTLLRINESA ARAVTEEEIV
ASLAEGRDAG VIEANEHQMV QNVFHLDDRS LTSIMVPRGD VQWLDADMTV TEALQASADD
HSKGGHSWYP VCRNSLDDVV GIISVARLLA LGSDAAGTTL YEHVLPASFL PETLSAMELL
EQLRARSGRM VFVVDEYGVV QGIMTPRDLL EAITGELQPV TEAEAWAMQR EDGSWLLDGL
MPISELKARL DIRDLPDEHR GRYNTVAGLL MAESGHLPIL GERVSCAGWI FEVIDLDGKR
IDKVLAISDL SENYSSQ