Gene Daci_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2156 
SymbolapaH 
ID5747718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2369775 
End bp2370620 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID641297239 
Productdiadenosine tetraphosphatase 
Protein accessionYP_001563181 
Protein GI160897599 
COG category[T] Signal transduction mechanisms 
COG ID[COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases 
TIGRFAM ID[TIGR00668] bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.699429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTT ACTGTATCGG CGATATCCAG GGATGCCACG ACGCCTTTGA GCGCCTGCTG 
CACCGCGTGG ACTTCTCCGC CAGCCGCGAT ACCTTGTACA TCCTGGGCGA CCTTGTGAAC
CGCGGTCCGG AATCGGACAA GGTGTTGCGC ACCTGCATGG CCGCCGGCGA CTCCATGCGC
GCCCTGCTGG GCAACCATGA CCTGCACCTG CTGGCCGCCG CCCAGGGCGT GCGACGCAGC
AGCCGGCGCG ACACGCTGGC CCGGGTGCTG GATGCGCCCG ATCGCGATCA GCTGCTGGAC
TGGCTGCGCC ACCAGCCGCT GGCGCGCAGC CACCGCATGG CGCATGGCGA GGAACTGCTG
ATGGTCCATG CCGGCGTGCT GCCGCAGTGG AGCAGCCAGG AAGTGATGGC GCTGGCGGGC
GAGGTGCATT CAGTACTGCG CAGCAAGCAG TTGCCCGATT TCTTGCAGGC CATGTACGGC
AACCAGCCCG ATCGCTGGTC ACCCGACCTG CAGGGCTGGG AGCGCCTGCG GGTCATCGTC
AACGCCTTGA CCCGGCTGCG CTTTTGCACC GCACAGGGTG TCATGGATTT CGACAGCACC
GAGTCGGCCG AGCAGGCGGC GCCCGGCCTC ATGCCCTGGT TCGATGTGCC GGGCCGCGCC
ACGGCGAGCG CAACGATTGC GTTTGGCCAC TGGTCCACGC TGGGCCACAT CAGCCGGCCC
GACCTGGTGG CGCTGGACAC CGGCTGCGTC TGGGGCGGCT GCCTGAGCAT GATGCGTTTC
GGCGATCACC TGGCGGACCG GGAACTGATC CAGGTGGACT GCCCGCAGGC ACAGGCCCCG
GGCTGA
 
Protein sequence
MALYCIGDIQ GCHDAFERLL HRVDFSASRD TLYILGDLVN RGPESDKVLR TCMAAGDSMR 
ALLGNHDLHL LAAAQGVRRS SRRDTLARVL DAPDRDQLLD WLRHQPLARS HRMAHGEELL
MVHAGVLPQW SSQEVMALAG EVHSVLRSKQ LPDFLQAMYG NQPDRWSPDL QGWERLRVIV
NALTRLRFCT AQGVMDFDST ESAEQAAPGL MPWFDVPGRA TASATIAFGH WSTLGHISRP
DLVALDTGCV WGGCLSMMRF GDHLADRELI QVDCPQAQAP G