| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2151 |
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| Symbol | |
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| ID | 5747713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2363796 |
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| End bp | 2365547 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297234 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001563176 |
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| Protein GI | 160897594 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.984421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACGAGC TTTTCCCCCC GGATTCCCCC GCCCCGGCTT CCAGCACCGC GCCCAGTCGC
TGGCAGCGCC TGGGCCTGCG CACGCAACTG GCCCTGGTCT TCGGCTCGCT GCTGGTGGGC
GTGACGGTGC TGATGTCGCT GGCATTCGGC GAGCTGCTGC GCTGGCGCAT GGAGCGCGAG
GTCAGCGCCT CGCTGCATGC CATGGCCTCC AACGCCGCGC GGCAGCTGTC CGATGGCCTG
TTCAGCCGCG CCCATACCGT GGAAGTGCTG GCCGCCTCGC CGGAGCTCTG GATCCAGGGG
CTGGAGTCCC CGGGCGTGGG CGCACTGCTC AACCGTGCCC GTTCGCTGAC GCCCACCAGC
CTCTGGATCG GCGTGGCCGA CGCCGAGGGC ACGGTGCGCA GCGCGACCGA TCAGGTGCTG
GTGGGCCACG ATGTCAGCGA CCGGCCCTGG TTCGAGCCGG GCCTGCAGCG CGTCCATGTG
GGCGATGTGC GCGCCTCTTC GCCTGCGATG TCCGCCTTGC TGCCGCCTGC GGCCGACGGC
GCGCCGCGCC GGTTCATGGA CTTCGCGGCG CCCATTCGCG TGGGCGATCT CACCCAGGGC
GTGCTGTGCA TGCACAGCAG CTGGGAATGG GTGCGCGAAA CCATGCAGAC CCTGCAGCAG
GCCGACAGCG CCGACCGGCA GATCGGCCTG TTCATCTTCG ACCGGCGTGG ACGGCTCATC
CACGCGCCGG GCGACAGCCT GGAGCCGCTG CTGGCCCTGG ACCAGCGCCT GCCGGTGGCC
CATACCGTGT CTGCCGATAC GGCCGATGCC ACGCTGCAGC CCGTACAGGT GGCGCGCTGG
CAGGACAGCC CGCAGAGCTT TCTGACGGCC ACCGTGCCGC TGCAGGCCCA CAACCGGGCA
ACCGCCATGG GCTGGCACAT CGTGGCCCGG CAGCCGCATG ACAGCGCCTA CGCGCCCGCG
CGCCAGGCCA TGCACCAGGT GCTGGCCGGC GGCCTGGCGG CCGCGCTGGT GGCCGCCGTC
ATCGCCTGGC TGGTGGCGCG CAGGCTGAGC CAGGATCTCA AGCGCCTGGC CCGTGCCGCC
AACGGCATCG ACGGCAGCGG CGCGGCCTCC GACATCCCGC AGCTGCACAG CAGCCGCGAA
GTGCATCGCC TTTCGCAAGC GCTGCGCGGC AGCATTGCCC AGTTGCGCTC GGCCAACGAG
GCCATGGAGC GCCAGGTGCG CGAGCGCACG CTGCAGCTGC AGCAGGCCAA TGCCGAACTG
GAGCACCAGG CGCGCAGCGA CCCGCTCACG GGCCTGCTCA ACCGCCGGGG CTTCGACTTC
CAGCTGGACT TCGCCATGGC GCTGGCGCGC CGCAGCGGCC GCCCCTTGAG CGTGCTCGTC
ATCGACGTGG ACCATTTCAA GCGCATCAAC GACCAGCACG GCCATGACAT GGGCGACGCC
GTGCTGCGCA CCCTGGCGCG CGCCTTCCGC ATGCGGCTGC GCGAGTCCGA CGTGCTGGCC
CGCATGGGGG GCGAGGAATT CCTGGCCCTG CTGCCCGACA CCACGGCCGA TGCCGCCGTG
GTCATTGCCG AGCAACTGCG CGAACTGCTG GCCACCACGC CCATGGCGCA TGGCGAGCCC
GTCACCGCCA GCGTGGGCGT GGCCACGCTG CGCGGCACCA CGGACACGGC CACCGCCATG
CTGCGCCGTG GCGACGAAGC GCTGTACGAG GCCAAGGGCG CGGGCCGCAA CAACGTGCAG
CTGCAGCGCT GA
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| Protein sequence | MNELFPPDSP APASSTAPSR WQRLGLRTQL ALVFGSLLVG VTVLMSLAFG ELLRWRMERE
VSASLHAMAS NAARQLSDGL FSRAHTVEVL AASPELWIQG LESPGVGALL NRARSLTPTS
LWIGVADAEG TVRSATDQVL VGHDVSDRPW FEPGLQRVHV GDVRASSPAM SALLPPAADG
APRRFMDFAA PIRVGDLTQG VLCMHSSWEW VRETMQTLQQ ADSADRQIGL FIFDRRGRLI
HAPGDSLEPL LALDQRLPVA HTVSADTADA TLQPVQVARW QDSPQSFLTA TVPLQAHNRA
TAMGWHIVAR QPHDSAYAPA RQAMHQVLAG GLAAALVAAV IAWLVARRLS QDLKRLARAA
NGIDGSGAAS DIPQLHSSRE VHRLSQALRG SIAQLRSANE AMERQVRERT LQLQQANAEL
EHQARSDPLT GLLNRRGFDF QLDFAMALAR RSGRPLSVLV IDVDHFKRIN DQHGHDMGDA
VLRTLARAFR MRLRESDVLA RMGGEEFLAL LPDTTADAAV VIAEQLRELL ATTPMAHGEP
VTASVGVATL RGTTDTATAM LRRGDEALYE AKGAGRNNVQ LQR
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