Gene Daci_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2148 
Symboldcd 
ID5747710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2360354 
End bp2360959 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID641297231 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_001563173 
Protein GI160897591 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAAGTG CAGCTAGGGA ACGAGGAATT GCCATGAGCA TCAAGAGCGA CAAGTGGATC 
CGTCGCATGG CCGAGGATCA CGGCATGATC GAGCCTTTCG AGCCGGCCCA GGTTCGCAAC
GTCGATGGCC GCAAGATCAT CAGCTACGGC ACCAGCAGCT ATGGCTACGA CATCCGCTGC
GCACCCGAAT TCAAGGTGTT CACCAACATC CACAGCACCG TGGTGGACCC CAAGAACTTC
GATGAGAAAA GCTTCGTCGA TTTCGAGGGC GACAGCTGCA TCATCCCGCC CAACAGCTTC
GCGCTGGCGC GCACGGTCGA GTACTTCCGC ATCCCGCGCA ACGTGCTGAC CATCTGCCTG
GGCAAGAGCA CCTACGCGCG CTGCGGCATC ATCGTCAACG TCACCCCCTT CGAGCCCGAA
TGGGAAGGCT ATGTGACGCT GGAGTTCTCC AACACCACGC CGCTGCCCGC CCGCATCTAT
GCCGGCGAGG GCTGCGCCCA GGTGCTGTTC TTCGAGAGCG ATCCCGACGA TGTCTGCGAG
GTCAGCTACC GCGACCGTGG CGGCAAGTAC CAGGGCCAGG TGGGCGTGAC GCTTCCCAAG
GCCTGA
 
Protein sequence
MTSAARERGI AMSIKSDKWI RRMAEDHGMI EPFEPAQVRN VDGRKIISYG TSSYGYDIRC 
APEFKVFTNI HSTVVDPKNF DEKSFVDFEG DSCIIPPNSF ALARTVEYFR IPRNVLTICL
GKSTYARCGI IVNVTPFEPE WEGYVTLEFS NTTPLPARIY AGEGCAQVLF FESDPDDVCE
VSYRDRGGKY QGQVGVTLPK A