Gene Daci_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2145 
Symbol 
ID5747707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2356905 
End bp2357345 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content69% 
IMG OID641297228 
Producthistidine triad (HIT) protein 
Protein accessionYP_001563170 
Protein GI160897588 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.538577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT TCGTCGATAC CTCGCCCCCG GGGCAGTGCC TTTTTTGCCG CCTCGTGGCG 
GGCGAGATCC CGTCCGCCAA GGTGTTCGAG GACGAGCAGA CCATCGCCTT CATGGACATC
GGCCAGGTCA ACCCCGGCCA TGTGCTGGTG GCAAGCAAGC GCCATGCCGT GACCCTGCTG
GACCTCACAC CCGACGAGGC CGGCGCCGTG ATGCGGACGG CCCAGCGCGT GGCGCAGGCC
GTGCAGGCAG CGTTCGACCC CGATGGCATC AGCCTGTTCC AGGCCAATGG CGCGGCGGGC
GGGCAGACCG TCTTCCACTT CCACCTGCAT GTGCTGCCGC GCCACGAGGG CGACGGCGTG
GGCCTGGGCT GGCCGCGCAA GGAGCCTGGC ATGCAGGCAC TGCAGGACTA TGCCGAGCGC
CTCAGGCAGG CGCTGGCCTG A
 
Protein sequence
MPMFVDTSPP GQCLFCRLVA GEIPSAKVFE DEQTIAFMDI GQVNPGHVLV ASKRHAVTLL 
DLTPDEAGAV MRTAQRVAQA VQAAFDPDGI SLFQANGAAG GQTVFHFHLH VLPRHEGDGV
GLGWPRKEPG MQALQDYAER LRQALA