Gene Daci_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2136 
Symbol 
ID5747698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2346309 
End bp2347415 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content69% 
IMG OID641297219 
Productinner-membrane translocator 
Protein accessionYP_001563161 
Protein GI160897579 
COG category[R] General function prediction only 
COG ID[COG4603] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.334815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.348757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGC TTGAGCAACG CCCCCAGGCC TCGAAGCTGT GGACCTACGG TTCGCCCGTG 
CTGGCGCTGG CCATCACGGT GCTGATCGGC GTGTGCCTGT TCGTGATGCT GGGCAAGGAC
CCGGTGCGCG GCCTGCAGGC CTTCTTCTGG GACCCCGTCA AGTCCACCTA TGCGCTGGGC
GAGCTGGCCG TCAAGGCCAC GCCGCTGCTG CTGATCGCGC TGGGGCTGGC CGTGTGCTTT
CGCTCCAATG TGTGGAACAT CGGTGCCGAA GGCCAGTTCG TCATCGGCGC CGTGGCCGCA
GGCGGCGTGG CGCTGCTGGC GGACAAGACC ACGGGCCCGT GGATCGTGCC CGCCATCCTG
GTGGCCGGCA TGCTCGGCGG CATGGTCTGG GCCGGCATCG TGGCCCTGCT GCGCGACCGC
TTCAACGCCA ATGAAATCCT GGTCAGCCTG ATGCTGGTCT ACGTGGCCAC CCTGGTGCTG
GGCTTTCTGG TCTACGGTCC GTGGAAGGAC CCCATGGGCT ACAACTTCCC GCAGACCAAG
ACCTTCGAGC GCGTCACGCA GATCCCCAAG CTCATGCAGG GCATGCGCAC CAACATCGGG
CTGCTGCTGG CGCTGGCTGC GGCGGCCATG CTGTGGGTCT TCCTGTTCCG CACCCGCGCC
GGCTTTGCGC TGCAGGTCGG TGGCCTGGCC CCGGCTGCTG CGCGCTACGC GGGCTTTTCC
TCGCGCCGCG CGCTGTGGAC GGCGCTGCTG ATCTCGGGCG CCGCCGCCGG CCTGGCCGGT
GCGCTGGAAG TGGCCGGCCC GCTGGGCCAG CTCACGCCCT ATGTCCCGGC CGGCTACGGC
TTCGCCGCCA TCATCGTGGC CTTCGTCGGC CGCCTGCATC CCGTGGGCAT GATCTTTTCC
GCGATTCTCA TGAGCATGTT CTATATCGGG GGCGAACTCG CCCAGTCGCG CCTGGGCCTG
CCCAAGGCGC TGACCGGCGT GTTCCAGGGC CTGCTGCTGT TCACGCTGCT GGCCTGCGAC
ACGCTGGTGG CCTACCGCGT GCGCTGGGTG TCCCGCACGC CCGTGGTTCC GCCCGCAGCG
GCGCCTGCCG TCAAGGAGGC CCGCTGA
 
Protein sequence
MFKLEQRPQA SKLWTYGSPV LALAITVLIG VCLFVMLGKD PVRGLQAFFW DPVKSTYALG 
ELAVKATPLL LIALGLAVCF RSNVWNIGAE GQFVIGAVAA GGVALLADKT TGPWIVPAIL
VAGMLGGMVW AGIVALLRDR FNANEILVSL MLVYVATLVL GFLVYGPWKD PMGYNFPQTK
TFERVTQIPK LMQGMRTNIG LLLALAAAAM LWVFLFRTRA GFALQVGGLA PAAARYAGFS
SRRALWTALL ISGAAAGLAG ALEVAGPLGQ LTPYVPAGYG FAAIIVAFVG RLHPVGMIFS
AILMSMFYIG GELAQSRLGL PKALTGVFQG LLLFTLLACD TLVAYRVRWV SRTPVVPPAA
APAVKEAR