Gene Daci_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2121 
Symbol 
ID5747683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2329426 
End bp2329776 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content64% 
IMG OID641297204 
Producthydroxyisourate hydrolase 
Protein accessionYP_001563146 
Protein GI160897564 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0156864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTGA GCACCCACGT CCTCGACACC ATGAATGGCT GCCCTGCAGC CGGCATGGCT 
GTCGCGCTGT ATTCCACCGA TGGCGACCAG GCCACGCTGA TCAAGAGCCT GGTGCTCAAC
CACGACGGCC GCACCGATGC GCCGCTGTTC GACAACAACA GCCTCAGGAC CGGCACCTAC
CGCCTGACCT TCGACGTGGC GGCCTACTTC AAGGCCCGTG GCGTGCAACT GCCCGAGCCC
AACTTCCTCA ACAAGGTGAG CCTGGACTTC GGCGTGGCCC ATGCCGACCA GCATTACCAT
GTGCCCCTGC TGGTCAGCCC CTGGAGCTAT TCCACGTACC GGGGCTCCTG A
 
Protein sequence
MGLSTHVLDT MNGCPAAGMA VALYSTDGDQ ATLIKSLVLN HDGRTDAPLF DNNSLRTGTY 
RLTFDVAAYF KARGVQLPEP NFLNKVSLDF GVAHADQHYH VPLLVSPWSY STYRGS