Gene Daci_2112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2112 
Symbol 
ID5747674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2317764 
End bp2318687 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content72% 
IMG OID641297195 
ProductLysR family transcriptional regulator 
Protein accessionYP_001563137 
Protein GI160897555 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.618524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0118464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC CCGTTTCAGC GCCATCGGAG ATGGCCTTCT TCTGCCTGCT GGCCCGCAGC 
GCCAGCCTGT CGGCCACGGC CCGCGAGCTG GGCATCACCA CGCCGGCGGC CAGCAAGCGC
CTGTCCCAGA TGGAGGCGCG GCTGGGCGTG CAACTGGTCA GCCGCACGAC GCGGCGCCTG
GGCCTGACCG ATGAGGGCCA GACCTACCTG GCCCATGCGC GGCGCATCCT GGACGACATT
GCCGCCATGG AGCAGGCCGT GGCCGGCATG CCCGGGCAGC CGCAGGGCCT GCTGCGCATC
AATGCCACGC TGGGATTCGG GCGCAGCCAT ATCGCGCCGC TGATCGCCAG CTTCGTGCGC
AGGCACCCGC AGATCCAGGT GCAGCTGCAG CTGTCGGCCT CGCCGCCGCC CCTGGTCGAT
GACAGCTTCG ACCTGTGCAT ACGCTTTGGC GAGCCGCCGG ACGCGCGCGT CATCGCGCGG
CGCCTGGCGC CCAACCGGCG GCTGCTGTGC GCGTCTGCCG CCTACCTGGC ACGGCGCGGC
ACGCCGGCCA CCCCGCGCGA GCTGATGCAG CACGACTGCA TCGACATCCG CCAGGGCGAC
GACACCCACG GCGTCTGGCG CTTCACCCAC AACGGCCCCG GCCGCAAGAC CGAGGCCATC
CGCCTGCGCG ACAGCCTGAG CACCAACGAT GGCGAGATCG CCGTGGGCTG GGCCCTGGCC
GGCCTGGGCA TCGTCATGCG CGCCGAATGG GATGTCGCCC GCTACCTGCG CAGCGGCCGC
CTGGTGCAGG TGCTGGCCGA CCATGCCACG GCGCCGGCCG ACATCCACGT GGTCTATCCG
CAGCGGCATG CGGCAACCCA GCGCGTGCAG CGCTTTGTGG AGCACCTGGC ACGGCACTTC
GATACGGCCG CGCCCGGTTT CTGA
 
Protein sequence
MSTPVSAPSE MAFFCLLARS ASLSATAREL GITTPAASKR LSQMEARLGV QLVSRTTRRL 
GLTDEGQTYL AHARRILDDI AAMEQAVAGM PGQPQGLLRI NATLGFGRSH IAPLIASFVR
RHPQIQVQLQ LSASPPPLVD DSFDLCIRFG EPPDARVIAR RLAPNRRLLC ASAAYLARRG
TPATPRELMQ HDCIDIRQGD DTHGVWRFTH NGPGRKTEAI RLRDSLSTND GEIAVGWALA
GLGIVMRAEW DVARYLRSGR LVQVLADHAT APADIHVVYP QRHAATQRVQ RFVEHLARHF
DTAAPGF