Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2106 |
Symbol | |
ID | 5747668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2308601 |
End bp | 2310898 |
Gene Length | 2298 bp |
Protein Length | 765 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641297189 |
Product | malic enzyme |
Protein accession | YP_001563131 |
Protein GI | 160897549 |
COG category | [C] Energy production and conversion |
COG ID | [COG0280] Phosphotransacetylase [COG0281] Malic enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.12577 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.161239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAAA ACCTGTCCAA CGCTGAACAA GCCCTGCGCG ACGCAGCCCG CGAATACCAT CGCAGCCCCA ACAAGGGCAA GATCTCCGTC ACGCCCACCA AGCCCTTGTC CAACCAGCGC GACCTGTCGC TGGCCTATTC GCCCGGCGTG GCCTACCCCT GCCTGGACAT CCAGGCCGAC CCCTCGCTGG CCGCCGAATA CACGGCGCGC GGCAACCTGG TCGGCGTCAT CACCAACGGC ACGGCCGTGC TGGGCCTGGG TGACATCGGC CCGCTGGCCG GCAAGCCGGT GATGGAAGGC AAGGGCTGCC TGTTCAAGAA GTTCGCTGGC GTCGACGTGT TCGACATCGA ACTGGCCGAG CGCGATCCGG ACAAGCTGAT CGAGATCATC GCCTCGCTCG AACCCACGCT GGGCGGCATC AACCTCGAGG ACATCAAGGC GCCCGAGTGC TTCTACATCG AGCAAGAGCT GTCCAAGCGC ATGAACATCC CCGTGTTCCA TGACGACCAG CACGGCACGG CCATCATCTC CAGCGCCGCC CTGCTCAACG GGCTGGAGCT GGTGGACAAG CAGATCGGCA ACGTCAAGAT CGCCGTCTCC GGCGCCGGCG CCGCTGCCAT CGCCTGCGTG AACGTGATGG TGGGCCTGGG CGTCAAGCGC GAAAACGTCT TCATGTGCGA CTCCAAGGGC GTGATCTACG AAGGCCGCCC CGGTGGCCTG GACGCCTCCA AGGCCCAGTA CGCGCAAAAG ACGGACGCCC GCACCCTGGC CGATGCCGTC AAGGACGCCG ACGTCTTCCT GGGCTGCTCG GCTCCCGGCG TGCTCACTGC CGACATGGTC AAGACCATGG CCGACAAGCC CATCATCCTG GCCCTGGCCA ACCCCGAACC CGAGATCCGC CCCGAGCTGG CCAAGGCCGT GCGCCCGGAC TGCATCATGG CCACGGGCCG TTCGGACTAC CCCAACCAGG TCAACAACGT CCTGTGCTTC CCCTACATCT TCCGTGGCGC GCTGGACTGC GGCGCCACCA AGATCACCGA AGCCATGAAG CTGGCCTGCG TGCGCGAAAT CGCCGCACTG GCCAAGCAGG ACGTCAGCGA TGAAGTCGCC GCTGCCTACC AGGGCAAGGA GCTGAAGTTC GGCCCCGACT ACCTGATCCC CACGCCCTTC GACACCCGCC TGATCCTGCG CATCGCGCCG GCCGTGGCCA AGGCTGCCGA AGAGTCCGGC GTCGCCACCC GCCCCATCGC CGACTACGAC GCCTACCGCG AGAGCCTGAC CCGCTTCGTC TACCAGACCA GCATGTTCAT GCGTCCGGTG TTCGCCGCTG CCAAGGCCAA CCAGCAGCGC GTGGCCTATG CCGAAGGCGA AGACGAGCGC GTGCTGCGCG CCGCCCAGGT CGCCGTCGAT GACGGCCTGG CCAAGCCCAT CCTGATCGGC CGCCCCGCCG TGATCGAGGC CCGAATCGCC AAGGCCGGCC TGCGCCTGGT GCTGGGCAAG GACGTGGAGA TCTGCAACCC CGAGGACGAT CCGCGCTTCC GCCAGTACTG GGAAACCTAC CACCGCCTGA TGGGCCGCAA CGGCGTCACG CCCGAGACGG CCAAGGCCGC CGTGCGCCGC TCCAACACGC TGATCGCCGC GCTCATGGTC CACCTGGGCG ATGCCGACGC CATGCTCTGC GGCCTGGTCG GCAAGTTCGA CAGCCACCTG GCCCATGTGC GCGACGTGCT CGGCCTCAAG CAAGGCGCCG GCGAGTTCGC CACCGTCAAC GCCGTGATGC TGGACAGCGG CACGCTGTTC ATCGCCGACA CCTACATCAA CGAGGCGCCC AACGCCACCG AGCTGGCCGA CATCGCCCGC CTGGCGGCCG AGGAAGTGGC CCGCTTCGGC CTGCCGCCCA AGGTGGCCTT CCTGTCGCAC AGCAACTACG GCTCGTCCAG CCGCCCCTCG GCGCTGAAGA TGCGCGCCGC GCGCGACCTG TTCGCCGCCG CCAACCCCGA CGTGGAATGC GACGGCGAAA TGCACGGCGA CTCCGCCCTG TCCGAAGCCA TCCGCGACCG CGCCCTGCTC GAGTCCTCGC TGCACGGCGA GGCCAACGTG CTGATCTGCC CCAACCTGGA CGCCGCGAAC ATCCTGTTCA ACGTGCTCAA GACCACGGGC GGCCACGGCA CGACCATCGG CCCCATCCTG CTGGGCGGCG CTGCCGCAGC CCATGTGCTG ACCCCCTCCG CCACCGTGCG CCGCGTGGTC AACATGACGG CCCTGGCCGC AGCCCAGGCC ATCGCTGCCC GCGGCTGA
|
Protein sequence | MTQNLSNAEQ ALRDAAREYH RSPNKGKISV TPTKPLSNQR DLSLAYSPGV AYPCLDIQAD PSLAAEYTAR GNLVGVITNG TAVLGLGDIG PLAGKPVMEG KGCLFKKFAG VDVFDIELAE RDPDKLIEII ASLEPTLGGI NLEDIKAPEC FYIEQELSKR MNIPVFHDDQ HGTAIISSAA LLNGLELVDK QIGNVKIAVS GAGAAAIACV NVMVGLGVKR ENVFMCDSKG VIYEGRPGGL DASKAQYAQK TDARTLADAV KDADVFLGCS APGVLTADMV KTMADKPIIL ALANPEPEIR PELAKAVRPD CIMATGRSDY PNQVNNVLCF PYIFRGALDC GATKITEAMK LACVREIAAL AKQDVSDEVA AAYQGKELKF GPDYLIPTPF DTRLILRIAP AVAKAAEESG VATRPIADYD AYRESLTRFV YQTSMFMRPV FAAAKANQQR VAYAEGEDER VLRAAQVAVD DGLAKPILIG RPAVIEARIA KAGLRLVLGK DVEICNPEDD PRFRQYWETY HRLMGRNGVT PETAKAAVRR SNTLIAALMV HLGDADAMLC GLVGKFDSHL AHVRDVLGLK QGAGEFATVN AVMLDSGTLF IADTYINEAP NATELADIAR LAAEEVARFG LPPKVAFLSH SNYGSSSRPS ALKMRAARDL FAAANPDVEC DGEMHGDSAL SEAIRDRALL ESSLHGEANV LICPNLDAAN ILFNVLKTTG GHGTTIGPIL LGGAAAAHVL TPSATVRRVV NMTALAAAQA IAARG
|
| |