Gene Daci_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2100 
Symbol 
ID5747661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2303871 
End bp2304350 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content52% 
IMG OID641297182 
Producthypothetical protein 
Protein accessionYP_001563125 
Protein GI160897543 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.311725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0296407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATT TGCGGGCGTT GGTAATTCTG GCCGCATGTG CGTTTTCGGG GGCGTGTATA 
GCTGGCTACG CACAATTGGC TCCTCCCGTT GGTTGGAGTC CCACTAGTGT CGGCGGATCT
GCTGGCACTT TTAATTTGGG CAACGCTGCA AACGGCTCTA GTCTTGTTGG CAATACCGTC
AGAACCACTG CATCGCTGAA TGTTGGTGGT CGTGCTATCT CTGTTCCTGC GTCAATGAGA
TTCGCGCAGA ATGCTCCAAA ATTTCTTGCA GGGCGTGTTG GTTCGGCTCT CGCTATTGGT
GGAGGCGCCG CATTAACGGG TGGATTATCT GTTGCTGCCG CGTTATTGCT TCCTATTGCT
GTTGAGTGGT GGCAGCAAAC CGAATTCGAG TGGGATGGTA ATAAGTGGCT GCAAAAAAAA
GAAGGTGCTG AACGGCTATT GGACCGATGT TTATGGTTAT GGGCAGTATC CAACTCCTGA
 
Protein sequence
MADLRALVIL AACAFSGACI AGYAQLAPPV GWSPTSVGGS AGTFNLGNAA NGSSLVGNTV 
RTTASLNVGG RAISVPASMR FAQNAPKFLA GRVGSALAIG GGAALTGGLS VAAALLLPIA
VEWWQQTEFE WDGNKWLQKK EGAERLLDRC LWLWAVSNS