| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2083 |
|---|
| Symbol | |
|---|
| ID | 5747644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2285461 |
|---|
| End bp | 2286843 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641297165 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001563108 |
|---|
| Protein GI | 160897526 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0551673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGGATAG CCCGACCTGT GGCCATTGCC GCCTTCAGCC TGGGGGCCGC TTTGTGCGGG
GCGTTTGCCC ATGCGTCGCA GGAGGCGGTG GACGAGGTCT CCCGGCTGCT GGAGCAGGGC
AAGGCGCCCC AGGCCGCCAA GCAGGCCGAG GCCTACCTCA AGCAGAACCC GGCCGATGTG
CAGATGCGCT TTCTGCAGGG CGTGATCGCG GCGGAGCAGC GCCAGAACGC CCAGGCCATC
AAGATCTTCA CTGCGCTGAC CCGTGATTAC CCCAGCCTGC CCGAGCCCTA CAACAACCTG
GCCGTGCTCT ACGCAGCCGA GGGCCAGGAG CGCAAGGCCT CGGAAGTGCT GGAGCAGGCC
ATTCGCACCA ACCCCAGCTA CGCCACGGCG CATGAGAACC TGGGCGACCT GTATGCGCGC
ATGGCCAGCG ATGCCTATGC CAAGGCCTTG CAACTGGACG GATCGCGCCA GGCCATCCAG
CCCAAGCTGG CCCTGATCAC GCAGATCTTC CCCAAGCAGG GCGGCGCCCA GGTCAAGACG
GCCCAGGCCA CGGCAACGGC AACTGCCGCC TCGACCAAGG TGGCCGATGC CAAGGCAGCC
CAGGCCCGCG AAGCCGACGC CAAGCTGGCC GAGACCCGCG CCGCCGAAGC CAAGGCCGCA
GAGGCCAAGG CTGCCGAATT CAAGGCCGCT GAAGTGAAGG CCGCCGATGC CAAGGCCGCC
CAGGCCAAGG CGGCGGAAGC CAAGGCAGCG GAAGCCAAGG CTGCCGAGGC CAAGGCTGCA
GAAGCCAAGC TGGCCCAGGC CAAGGCGGCG GAAGCCAAGG CGGCAGAGGC CAAGCTGGCC
CAGGAAAAGG CAGCTCAGGC CGCACAGGAC AAGGCCCGCG CGGCCGAGGA AGCCAGGCAG
GCAGCGGCCA AGGCCGCGGC TCCGGCCACC GCAGCAGCCG CCACCGCAGC CGCCGCCACC
GCAGCCGCCG CCACCGCCGT GGCCGCCGCC GAGCCTGCCA AGGCAGCGCC TGCCGTCGAT
GAGAAGAAGG CCGCACAATC GGCTGCCGCG CAGGAAGTGG AAGCCGCCGT CAAGGCCTGG
TCCACCGCAT GGGCCGGCCA GGACATGGAC CGCTACCTGG ACGCCTACAG CGACCACTTC
TCCCCGGCCG ATGGCAGCAG CCTGGCCAAG TGGAAGGAAC AGCGCCGCCA GCGCATCGTT
GGCCGCACCG CCATCGTCGT CAATGTGCGC GACCTGAAGG TGACCGTGGA TGGCGACAAG
GCCACGGCCC AGTTCCGCCA GTACTACGCA TCGGGCGCGC TCAAGACCAC TACCCGCAAG
ACCCTGCGCA TGCAGCGCGA AAAGGGACAA TGGCGCATCA CCCATGAAGG AACCGGCTCC
TGA
|
|---|
| Protein sequence | MRIARPVAIA AFSLGAALCG AFAHASQEAV DEVSRLLEQG KAPQAAKQAE AYLKQNPADV
QMRFLQGVIA AEQRQNAQAI KIFTALTRDY PSLPEPYNNL AVLYAAEGQE RKASEVLEQA
IRTNPSYATA HENLGDLYAR MASDAYAKAL QLDGSRQAIQ PKLALITQIF PKQGGAQVKT
AQATATATAA STKVADAKAA QAREADAKLA ETRAAEAKAA EAKAAEFKAA EVKAADAKAA
QAKAAEAKAA EAKAAEAKAA EAKLAQAKAA EAKAAEAKLA QEKAAQAAQD KARAAEEARQ
AAAKAAAPAT AAAATAAAAT AAAATAVAAA EPAKAAPAVD EKKAAQSAAA QEVEAAVKAW
STAWAGQDMD RYLDAYSDHF SPADGSSLAK WKEQRRQRIV GRTAIVVNVR DLKVTVDGDK
ATAQFRQYYA SGALKTTTRK TLRMQREKGQ WRITHEGTGS
|
|---|
| |