| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2082 |
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| Symbol | |
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| ID | 5747643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2279889 |
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| End bp | 2285000 |
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| Gene Length | 5112 bp |
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| Protein Length | 1703 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297164 |
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| Product | hypothetical protein |
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| Protein accession | YP_001563107 |
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| Protein GI | 160897525 |
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| COG category | [K] Transcription |
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| COG ID | [COG5665] CCR4-NOT transcriptional regulation complex, NOT5 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.112234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC AATCGATGCA GCCCACTGGC AACACCACCG TCAGCCCCGT GCAGCTTGCT
GACCAGCAGC CCTCCGCCGT TGTGCTTGCA CAGCTGGACA CATCGAACAC GCAGCCCGGC
GCGGCTGCGG TGCTCATGCC CCGGGGCGCC GGTCCCGCCA CGATGTCCCA GGTCAGCCCG
GGCGTGCAGA TCGTGCGCAA CGGCGAAACC CTGATGGCCC AGCCCGGCAG CGCTCTGCAG
GTGGGCGACA AGATCATCGT GCCCGCCGAC GGCAGCGCCA AGGCGCTGTT CCAGGGCAAG
GACGGCCAGA CCCTGGTCGG CACCTTCGAG GGCGGCACGC AGGCCACGCT GACCCAGCGC
GACGGCGACG GCGCCGGGGC CATGGTGCTG GACCTGGCCT CTGGCAACGT CCAGGTGGCA
CCCGCCAATG ACGGCGACGC CCTGGGCCTG ATCGTCACCA AGGAAAGCGC TGCGGCCGCA
GCCGGTGGCT CCGTGCTCAG CGACTTCCTG CTGGCCGGCC TGATCGGCGC GGGCGGCGTG
GGCCTGATCG CAGCAGCCAA CAGCAGCGAC GACGATCCGG CGCCCCCGCG CCCGACCGAC
CCCACCAACC CGACGGATCC CACGAATCCG ACCAACCCCA CGAACCCGAC AAACCCCACC
AATCCGACCA ATCCGACGGA CCCCACGAAT CCGACCAATC CCACGAACCC GACAAATCCG
ACCAATCCTA CGAATCCGAC CAATCCCACG GATCCTACGA ACCCGACCAA CCCCACCAAT
CCAACAAACC CAACGAACCC GACCAATCCG ACCAATCCCA CGGATCCGAC CAACCCCACG
AACCCGACAA ACCCGACGAA TCCGACCAAT CCCACGGAGC CCACCAACCC GACGAATCCG
ACCAACCCCA CGGATCCCAC GAACCCGACC AACCCTACGA ACCCCACCAA TCCGACCAAC
CCCACGGATC CCACGAACCC GACCAACCCT ACTAACCCCA CCAATCCGAC CAACCCCACG
GATCCCACCA ACCCGACCAA TCCTACGAAC CCGACCAACC CGACCAACCC CACGGATCCC
ACCAACCCGA CCAATCCCAC GAACCCGACG AATCCGACCC ATCCCACGGA TCCTACGAAC
CCGACCAATC CGACCCACCC CACGGACCCC ACCAATCCGA CCAACCCGAC CCATCCCACG
GAACCCACCA ACCCGACGGA TCCCACGGAC GGCCATGGCC TGATCACCTC GGTGCAGGAC
GTGGTGGGTG CACTGGCGGG CGGCACGGTG GCCGGCCCGG TGGGCAACCT GATCGATACG
CTGGTCAATC CCGGCAGCGG CACGCTGTCC GGGGTGACAG GCCTGCTGGA GAGCCTGACC
AATACCAACG GCGGCCCGCT GGGCGTGCTG ACCGAGCTGG TCGATGGTCT GGTCAACATC
CAGAACCAGG GCCTGGAGCC CCTGATCAGC ACGCTCAATG AGCTGCTCAA GGGCCTGGAC
GAAGCGGGCT CCGGAGGCGC CATCGGCACC GTCGTGGACA ACGTGCTGGG CGGCCTGCTC
GATGAAAACG GTGCGCTGGG CGGCCTGCTG GCCGGCGTGG GCGGACTGCT GGGCGGCCTG
GTGGGTGGCG GAACGGGCAA CCCGCCCGGC ACGCCTGACA GCGGCGTGGT CACCTCCGTG
CAGGACGTCG TGGACGGCCT GCTGGGCGGC ACCGTGGCAG CCCCCGTGGG CCAGTTGCTC
GATGCGCTGA CCAATCCCAC GGACGGACTG CTGTCCACCG TGACCGGCGC GCTGGAGAAC
CTGACCAATG TGGAGGGCGG CCCGCTGGGC GTGCTCACCG AGCTGGTCAA CGGCCTGACC
CAGGTGGACG GCGAAGGCCT TGCCCCCGTG ATCGGCACCC TCAACGAGCT GATTGCCGGC
CTGGGCAACG GCCTGGGCGA AGGTGGCCTG GGCGGACTGG TCGGAGGCCT GCTGGGCGGC
CTGGTGCCCG GTGGCGGCAC GGGCGGTGGC ACGGGTGAAG GCCTGGTCAC CACGGTGCAG
GATGTGGTGG ACGGCCTGCT CGGCGGCACC GTGGCAGCCC CTGTGGGCCA GCTGCTGGAT
GCGCTTACCA ATCCCACCGA TGGCACGGCC TCGGTCGTCA CTGGCCTGCT GGAAGGCCTG
ACCAGCGTGG ACGGCGGCCC CCTGGGCGTG CTGACCGAAC TGGTCAATGG CCTGACCCAG
GTGGACGGCC AGGCCCTGCA GCCGGTGATC GGCACCCTCA ACGGCCTGAT TGCCGGCCTG
GGCAACGGCC TGGGCGAGGG CGGCATCGGC GAGCTGGTGG ACGGCCTGTT GGGCGGCCTG
ATCCCCGGCG GCACGGGCGG CGGCAGCGGC GACGGCCTGG TCACCACGGT CCAGGGCGTG
GTGGACGGCC TGCTCGGCGG CACCGTGGCA GCCCCTGTGG GCCAGCTGCT GGATGCGCTT
ACCAATCCCA CCGATGGCAC GGCCTCGGTC GTCACCGGCC TGCTGGAAGG CCTGACCAGC
GTGGACGGCG GCCCCCTGGG CGTGCTGACC GAACTGGTCA ATGGCCTGAC CCAGGTGGAC
GGCCAGGCCC TGCAGCCCGT GATCGGCACG CTCAACGGAC TGATTGCCGG CCTGGGCAGC
GGCCTGGGTG AAGGCGGCAT TGGCGAGCTG GTCAGCGGTC TGCTGGGTGG CGATGGCGGC
CTGCTGGGCG GTGTGATCGG CGGCGACGGT GGCCTGCTGG GCGGCGTGCT CGGCGATGAC
GGCCTGGTCG GCGGTCTGCT GGGTGGCGAC GGTGGCCTTC TGGGCGGCGT GCTCGGCGGC
GATGGCGGCC TGCTGGGTGG CGTGCTTGGC GAAGACGGCC TGGTCGGCGG CCTGCTGGGC
GGCCTGGTTC CGGGCGGCGG CACAGGCAGC GGCGACGGCC TTGTCACCAC GGTGCAAAAC
ACCGTTGGCG ACCTGCTCGG CGGCACGGCC GGCGCCCCTG TGGGCCAGGT ACTGGATGCG
CTGATCGACC CCGGCACCGG CGCACTGTCC GTGGTCACGG GCCTGGTGGA AGGCGTGACC
CAGGTCAACG GTGGTCCGCT GGGTGTCGTG ACGGACCTGG CCAACGGTCT GACGCAGGTC
CCGGGCCAGG CACTGCAGCC GGTGATCGGC ACCGTCAACG GCGTGCTGGC CGGCCTGACG
GGCGGCGATG GCCTGCTGGG TGGCGTGGTC GGCGGCGACG GCGGCCTGCT GGGTGGCGTG
CTTGGCGACA ACGGCCTCGT CGGCGGTCTG CTGGGCGGCG ATGGTGGCCT GCTGGGCGGC
GTGCTTGGCG GCGATGGCGG CCTGCTGGGT GGCGTGCTTG GCGATGACGG CCTGGTCGGC
GGCCTGCTGG GTGGCGACGG TGGCCTGCTG GGCGGCGTGC TTGGCGGCGA TAGCGGCCTG
CTGGGCGGCG TGCTTGGCGG CGATAGCGGC CTGCTGGGTG GCGTGCTTGG CGATGACGGC
CTGGTCGGCG GTCTGCTGGG TGGCGACGGT GGCCTGCTGG GCGGCGTGCT GGGCGGCGAC
GGTGGCCTGC TGGGTGGCGT GTTGGGCGAA GACGGCCTGG TCGGCGGTCT GCTGGGTGGC
GACGGTGGCC TGCTGGGCGG CGTGCTGGGC GGCGACGGTG GCCTGCTGGG TGGCGTGTTG
GGCGAAGACG GCCTGGTCGG CGGCCTGCTG GGCGGCCTGG TTCCGGGCGG CGGCACAGGC
AGCGGCGACG GCCTTGTCAC CACGGTGCAA AACACCGTTG GCGACCTGCT CGGCGGCACG
GCCGGAGCGC CTGTGGGCCA GGTACTGGAT GCGCTGATCG ACCCCGGTAC CGGCGCCCTG
TCTGTGGTCA CGGGCCTGGT GGAAGGCGTG ACCCAGGTCA ACGGTGGTCC GCTGGGTGTA
GTGACGGACC TGGCCAACGG CCTCACACAG GTCCCGGGCC AGGCACTGCA GCCGGTGATC
GGCACCGTCA ACGGCGTGCT GGCCGGCCTG ACGGGCGGCG ATGGCCTGCT GGGTGGTGTG
GTCGGCGGTG ACGGCGGCCT GCTGGGTGGC CTCACGGGCG GACTGACGGG CGGCCTTGGT
GGCGGCTCCG GCCTGGTCGG CGGCCTGCTC GATACGGTGG TCGGCGACAA CGGCATCGTT
GGCGGACTGC TGGGTGGCGA CGGCGGCCTG CTGGGTGGCC TCACTGGCGG ACTGACGGGT
GGCTCCGGCC TGGTCGGCGG CCTGCTCGAT ACGGTGGTCG GCGACAACGG CATCGTTGGC
GGACTGCTGG GCGGTGACGG CGGCCTGCTG GGTGGCCTCA CTGGGGGCGT CACAGGCGGA
TCGGGCCTGG TCGGTGGCCT GCTGAACACC GTGACGGGCG ACAACGGCAT CGTCGGCGGG
GTGCTCAACA CCGTGGCCGG TGACAACGGC GTCGTCAGCG GCGTGCTCGA CACCGTGGCC
GGTGGCAGCG GCATCGTCAG CGGCGTGGTC AACACCGTGG CGGGTGACAA CGGTGTCGTC
AGCGGGCTGG TCAACACGGT GGCTGGTGAC CACGGCATCG TCAGCGGCGT GGTCAATACC
GTGGCAGGCG ACAACGGTGT CGTCAGCGGG CTGGTCAACA CCGTGGCAGG CGACAACGGA
ATCGTCAGCG GTGTCGTCAA TACCGTGGCC GGAGGCAGCG GCATCGTCAG CGGCGTGGTC
AACACCGTGG CGGGCGACAA CGGTGTCGTC AGCGGACTGG TCAACACGGT GGCCGGCGAT
CACGGTGTCG TCAGCGGGCT GGTGAACACC GTGGCTGGCA GCAACGGAAT CGTCAGCGGC
GTGGTCAACA CCGTGGCCGG CGACAACGGA ATCGTCAGCG GCGTGGTCAA CACGGTGGCC
GGCAACAACG GCATCGTCAG CGGCCTGCTG GGTGGCGGCA GCAGCGGCGG CGGCCTGCTG
GGCGGGCTGC TGGGGGGATC GTCCGGCGGC GGGCTGCTCG GTGGCCTGCT GGGTGGCACA
TCGCACGCGG CAGCGGCCTC GGTCGCCGAG CTGGATCCGA TTGCCACCTC CATCAGCAGC
CATGCCAGCA GCACGGCCGA TGCAGCAGCC AGCGTGCTGA CGCAGCAACT GCACCACAAC
ACCCTGCTCT GA
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| Protein sequence | MTAQSMQPTG NTTVSPVQLA DQQPSAVVLA QLDTSNTQPG AAAVLMPRGA GPATMSQVSP
GVQIVRNGET LMAQPGSALQ VGDKIIVPAD GSAKALFQGK DGQTLVGTFE GGTQATLTQR
DGDGAGAMVL DLASGNVQVA PANDGDALGL IVTKESAAAA AGGSVLSDFL LAGLIGAGGV
GLIAAANSSD DDPAPPRPTD PTNPTDPTNP TNPTNPTNPT NPTNPTDPTN PTNPTNPTNP
TNPTNPTNPT DPTNPTNPTN PTNPTNPTNP TNPTDPTNPT NPTNPTNPTN PTEPTNPTNP
TNPTDPTNPT NPTNPTNPTN PTDPTNPTNP TNPTNPTNPT DPTNPTNPTN PTNPTNPTDP
TNPTNPTNPT NPTHPTDPTN PTNPTHPTDP TNPTNPTHPT EPTNPTDPTD GHGLITSVQD
VVGALAGGTV AGPVGNLIDT LVNPGSGTLS GVTGLLESLT NTNGGPLGVL TELVDGLVNI
QNQGLEPLIS TLNELLKGLD EAGSGGAIGT VVDNVLGGLL DENGALGGLL AGVGGLLGGL
VGGGTGNPPG TPDSGVVTSV QDVVDGLLGG TVAAPVGQLL DALTNPTDGL LSTVTGALEN
LTNVEGGPLG VLTELVNGLT QVDGEGLAPV IGTLNELIAG LGNGLGEGGL GGLVGGLLGG
LVPGGGTGGG TGEGLVTTVQ DVVDGLLGGT VAAPVGQLLD ALTNPTDGTA SVVTGLLEGL
TSVDGGPLGV LTELVNGLTQ VDGQALQPVI GTLNGLIAGL GNGLGEGGIG ELVDGLLGGL
IPGGTGGGSG DGLVTTVQGV VDGLLGGTVA APVGQLLDAL TNPTDGTASV VTGLLEGLTS
VDGGPLGVLT ELVNGLTQVD GQALQPVIGT LNGLIAGLGS GLGEGGIGEL VSGLLGGDGG
LLGGVIGGDG GLLGGVLGDD GLVGGLLGGD GGLLGGVLGG DGGLLGGVLG EDGLVGGLLG
GLVPGGGTGS GDGLVTTVQN TVGDLLGGTA GAPVGQVLDA LIDPGTGALS VVTGLVEGVT
QVNGGPLGVV TDLANGLTQV PGQALQPVIG TVNGVLAGLT GGDGLLGGVV GGDGGLLGGV
LGDNGLVGGL LGGDGGLLGG VLGGDGGLLG GVLGDDGLVG GLLGGDGGLL GGVLGGDSGL
LGGVLGGDSG LLGGVLGDDG LVGGLLGGDG GLLGGVLGGD GGLLGGVLGE DGLVGGLLGG
DGGLLGGVLG GDGGLLGGVL GEDGLVGGLL GGLVPGGGTG SGDGLVTTVQ NTVGDLLGGT
AGAPVGQVLD ALIDPGTGAL SVVTGLVEGV TQVNGGPLGV VTDLANGLTQ VPGQALQPVI
GTVNGVLAGL TGGDGLLGGV VGGDGGLLGG LTGGLTGGLG GGSGLVGGLL DTVVGDNGIV
GGLLGGDGGL LGGLTGGLTG GSGLVGGLLD TVVGDNGIVG GLLGGDGGLL GGLTGGVTGG
SGLVGGLLNT VTGDNGIVGG VLNTVAGDNG VVSGVLDTVA GGSGIVSGVV NTVAGDNGVV
SGLVNTVAGD HGIVSGVVNT VAGDNGVVSG LVNTVAGDNG IVSGVVNTVA GGSGIVSGVV
NTVAGDNGVV SGLVNTVAGD HGVVSGLVNT VAGSNGIVSG VVNTVAGDNG IVSGVVNTVA
GNNGIVSGLL GGGSSGGGLL GGLLGGSSGG GLLGGLLGGT SHAAAASVAE LDPIATSISS
HASSTADAAA SVLTQQLHHN TLL
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