| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2074 |
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| Symbol | |
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| ID | 5747635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2269743 |
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| End bp | 2270312 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297156 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001563099 |
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| Protein GI | 160897517 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.672296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.649515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGGA CCTCGCTATG GCTGTGCGTC TGCATCACAT GGCTCGCAAC GATTGCGGTC
ATGGATCTGC GCATCCGGCG CGTGCGCAAC TGGATGGTGC TGCTCGGCCT GGCCACAGGC
GCGGCGGCAC TGGCCAGTGG GGCGCAGCCG TTCCAGGTCT CGGCCTGGAA CGCGCTGGCC
GGACTGCTGG CGGGGTTTGT CGTGCTGCTT CCTTTCTATG CACTGCGCTG GATGGGAGCG
GGCGACGTCA AGTTCGGCGC GGTCGCAGGG CTGTGGTTCG GGCTGAGCTT CGACCTGCTG
CTGATCTGGA CTGGCGGCAG CCTGCTGGCC GGCCTGCACG GCCTGCTGGT GCTGTCATTG
CGCCACCTGA GCCACAGCCC CACCGGCCTG TGGCTGCAGG CCCGGCTGCC CCTGGCCTGG
GCGGCCCGCC TGGCACCGCT GGGCGCTGCG TCTCAGCCCG CAGGCGCCAC CGATGGACCG
CGCCAGCCCC AGCGCTCCAT TCCCTATGCC GGCTACATGG CCATTGCGGC CATCGCCCTG
GCCTGGCGCC ACAGCCAGCC GCTTGCCTGA
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| Protein sequence | MERTSLWLCV CITWLATIAV MDLRIRRVRN WMVLLGLATG AAALASGAQP FQVSAWNALA
GLLAGFVVLL PFYALRWMGA GDVKFGAVAG LWFGLSFDLL LIWTGGSLLA GLHGLLVLSL
RHLSHSPTGL WLQARLPLAW AARLAPLGAA SQPAGATDGP RQPQRSIPYA GYMAIAAIAL
AWRHSQPLA
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